Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01035 ATGGCAGCTAAAGCTTATGATGTTGCAGCTTTAGCTTTCAAAGGTGAAGCTGCTTCCTTAAATTTCCCTAACTCAGCCACCTCTTTGCCGCGTCTTAGTTCACAAACTTCTTCTATTAGGTCGATTCAGTTTGCCGCAATGAAAGCCGGTGAGAAACACTTCTCATATTGTGAGGGCTCCGAACCATTCTTTGCTGAAACAACTAAGAATGGTTCGGAGTCTATAGATTGTGGAAGGTTGTTTTGGGATGAGGAAGAGGTTTTCAACATGCCGGGTTTGATAAACAGTATGGCTGAAGGGTTAGTTATGACACCACCGGCGTTGCAGAGAGGCTTCAATTGGATTGATGGGGAAACTACTATGGACTTAACTTTGTGGAAAAATTGA 387 0.4315 MAAKAYDVAALAFKGEAASLNFPNSATSLPRLSSQTSSIRSIQFAAMKAGEKHFSYCEGSEPFFAETTKNGSESIDCGRLFWDEEEVFNMPGLINSMAEGLVMTPPALQRGFNWIDGETTMDLTLWKN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01035 128 Gene3D AP2/ERF domain 1 25 IPR036955 GO:0003700|GO:0006355
Vifa3g01035 128 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 127 IPR045277 GO:0003700
Vifa3g01035 128 ProSiteProfiles AP2/ERF domain profile. 1 23 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01035 Vifa-Chr3 250610521 250610907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01035 1 126 AP2-EREBP Transcription Factor Family AT4G25490 36.567 1.42e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01035 - - mtr:25483880 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01035 3 250610521 250610907 Vifa3g01035 3 250610521 250610907 ECH