Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01027 ATGTGGAGTGTGTTAGTAACATATATCTTTCGTGGAATATCTCTTCTTTGTTTTCTTACGAGGGGAGGAGGGAGGTTTTGTGATTTTGGGCTTTCCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCCGAGGACTCCTGAGTGATGGCTCCAGAAGTTCTTCCCGTGGGGGTAATTTGAACCCAGCACAGGTTGTTGCTGCTGTTGGCTTCAAGGGAAAAAGGCTCGAGATCCCACGTGAGTTGAATCCCCAAATAGCTGCAATAATTGAAGCTTGCTGGGCCAATGAGCCCTGGAAACGGCCTTCCTTTTGCCAGCATTATGGATTCTCTGAGATCATTACTCAAACCCCCTACACCCTCAACCTGGTATTCCAAACATGCCGCCGCTCACCTGAATAG 411 0.4818 MWSVLVTYIFRGISLLCFLTRGGGRFCDFGLSPLKGQYISLFQVSCRGLLSDGSRSSSRGGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPSFCQHYGFSEIITQTPYTLNLVFQTCRRSPE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01027 136 Gene3D Transferase(Phosphotransferase) domain 1 39 120 - -
Vifa3g01027 136 Pfam Protein tyrosine and serine/threonine kinase 62 109 IPR001245 GO:0004672|GO:0006468
Vifa3g01027 136 SUPERFAMILY Protein kinase-like (PK-like) 65 127 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01027 Vifa-Chr3 245446105 245447106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01027 61 107 MAP Kinase Kinase Kinase AT5G03730 89.362 2.58e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vifa3g01027 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01027 K14510 - tpra:123895552 99.7525