Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01026 ATGGAAATGCCTGCGAGGAGATCTAATTACACGGTTCTAAGTCAAGTTCCGGACGATCCGTTTTCTTATGCTGCCGGAGGTAGTGCTCCGTCGACTTCGAGTGATGGAAAAGCGAGCAGAGGCGGAAAGTTAGATAGAGGTTTAGGTTTTGATTGGGAGTTAGTTGGCGATCATAGGTTGACTCAGCAAGGGAACAATCGGATCGGGAATTTGTACGCTTCAACCGGGTTACAGAGACAATCAAGTGGGAGTAGCTATGGGGAAAGCTCGTTGTCTGGTGGAGGGGAGTATTATGCGCAGACGCTGTCCACGGCGGCGGCTAGTGAGGTGGATGCATTTGGATATTTGCACGAGGATGGGTTTAAGGTTGGTGAGGTCAGGAATCACTTGTCCGAGGGTCCGGGCTGGACGGGTGGATCTTCTGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTTGCTTTGGCGTTGAGGCTTTCTTCGGATGCTACTTGTGCGGATGATCCCAATTTTCTGGATCCGGTGCCGGAAGAAGCTTCTTTGAGGTTATCTTCTTCGCCGGAGGCTTTGTCTCATAGATTCTGGGTGAATGGCTGCCTATCGTACTCTGATAAAATCCCCGATGGATTTTACTTAATTCATGGGATGGATTCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCATCAGTTGATACTCTAAAGTCAGTGCATCCCCGCATCGATTCATCCCTTGAAGTAGTTTTGGTGGATCGGCACCATGATGCCAGCTTGAGAGAACTGCAAAACATAGTTCAAGACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCACCTTTCGAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGCTGGGGAGGATGAATTTCTTTCTTTCTGGAGGGATTGCAGTAATAACCTGAAAGATTGCTTAGGATCTGTTGTTTTTCCCATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCCATATTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAGGGATGTAAATATTGCAAAAGAGATGATGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAATATCATGTTGATTTAATTGGGAAGCCAGGACACTTATGCGAACCTGATTCTTTGCTGAATGGTCCATCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTCAAACTACAATTGATTTCAGGTCACTTGCCAAACAGTATTTCTCAGACTGTTTATCTCTTGAGCTTTTCTTCGACAACAGTTCTGCAGAGCACTTCGATGGGAAAAGCAATGAAAGGAATAACCTTAAGCCAATTTCGAGTGACATCAACAGAAGTTCTCACCTTCCTTTATATCTGCAATCTGCTCTTCCGAGCACACATGATCAAGCTTCTGAAACATATATGTTATGTAACCCTCCTCAGAACTTTATAGACTCGACAACTGTGGGCAAGTATCCACCTCCTTTAAAGCATAAGCGTCCTGTTTGTATTGCCAATGATGATGTCATTGAGGGTAGGAGGTTTGTCGAAGGAAGTCAATTGATTCCTAGCAAGCCTACTCGGGAGGTTGCCTTTGACATGGAGGATTTAGCCATACCGTGGAATGATCTTAATTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACACCGTGCTGAGTGGAATGGCTCGTTGAAATTGTATGGAAGGAATGAACAAGGGTAG 1800 0.455 MEMPARRSNYTVLSQVPDDPFSYAAGGSAPSTSSDGKASRGGKLDRGLGFDWELVGDHRLTQQGNNRIGNLYASTGLQRQSSGSSYGESSLSGGGEYYAQTLSTAAASEVDAFGYLHEDGFKVGEVRNHLSEGPGWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPEEASLRLSSSPEALSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRIDSSLEVVLVDRHHDASLRELQNIVQDISCSSITTTEVVDHLSKLVCNRMGGSASAGEDEFLSFWRDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLEREYHVDLIGKPGHLCEPDSLLNGPSSISFCSPLRFPRLKPAQTTIDFRSLAKQYFSDCLSLELFFDNSSAEHFDGKSNERNNLKPISSDINRSSHLPLYLQSALPSTHDQASETYMLCNPPQNFIDSTTVGKYPPPLKHKRPVCIANDDVIEGRRFVEGSQLIPSKPTREVAFDMEDLAIPWNDLNLKEKIGSGSFGTVHRAEWNGSLKLYGRNEQG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01026 599 Pfam Ethylene-responsive protein kinase Le-CTR1 192 397 - -
Vifa3g01026 599 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 194 401 - -
Vifa3g01026 599 MobiDBLite consensus disorder prediction 21 42 - -
Vifa3g01026 599 Gene3D Phosphorylase Kinase; domain 1 553 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01026 Vifa-Chr3 245439223 245443746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01026 1 589 MAP Kinase Kinase Kinase AT5G03730 54.854 1.71e-180 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01026 K14510 - gmx:100800648 872.463