Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01025 ATGGAAATGCCTGCGAGGAGATCTAATTACACGGTTCTAAGTCAAGTTCCGGACGATCCGTTTTCTTATGCTGCCGGAGGTAGTGCTCCGTCGACTTCGAGTGATGGAAAAGCGAGCAGAGGCGGAAAGTTAGATAGAGGTTTAGGTTTTGATTGGGAGTTAGTTGGCGATCATAGGTTGACTCAGCAAGGGAACAATCGGATCGGGAATTTGTACGCTTCAACCGGGTTACAGAGACAATCAAGTGGGAGTAGCTATGGGGAAAGCTCGTTGTCTGGTGGAGGGGAGTATTATGCGCAGACGCTGTCCACGGCGGCGGCTAGTGAGGTGGATGCATTTGGATATTTGCACGAGGATGGGTTTAAGGTTGGTGAGGTCAGGAATCACTTGTCCGAGGGTCCGGGCTGGACGGGTGGATCTTCTGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTTGCTTTGGCGTTGAGGCTTTCTTCGGATGCTACTTGTGCGGATGATCCCAATTTTCTGGATCCGGTGCCGGAAGAAGCTTCTTTGAGGTTATCTTCTTCGCCGGAGGCTTTGTCTCATAGATTCTGGGTGAATGGCTGCCTATCGTACTCTGATAAAATCCCCGATGGATTTTACTTAATTCATGGGATGGATTCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCATCAGTTGATACTCTAAAGTCAGTGCATCCCCGCATCGATTCATCCCTTGAAGTAGTTTTGGTGGATCGGCACCATGATGCCAGCTTGAGAGAACTGCAAAACATAGTTCAAGACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCACCTTTCGAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGCTGGGGAGGATGAATTTCTTTCTTTCTGGAGGGATTGCAGTAATAACCTGAAAGATTGCTTAGGATCTGTTGTTTTTCCCATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCCATATTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAGGGATGTAAATATTGCAAAAGAGATGATGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAATATCATGTTGATTTAATTGGGAAGCCAGGACACTTATGCGAACCTGATTCTTTGCTGAATGGTCCATCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTCAAACTACAATTGATTTCAGGTCACTTGCCAAACAGTATTTCTCAGACTGTTTATCTCTTGAGCTTTTCTTCGACAACAGTTCTGCAGTCTCCATTTCAGAGCACTTCGATGGGAAAAGCAATGAAAGGAATAACCTTAAGCCAATTTCGAGTGACATCAACAGAAGTTCTCACCTTCCTTTATATCTGCAATCTGCTCTTCCGAGCACACATGATCAAGCTTCTGAAACATATATGTTATGTAACCCTCCTCAGAACTTTATAGACTCGACAACTGTGGGCAAGTATCCACCTCCTTTAAAGCATAAGCGTCCTGTTTGTATTGCCAATGATGATGTCATTGAGGGTAGGAGGTTTGTCGAAGGAAGTCAATTGATTCCTAGCAAGCCTACTCGGGAGGTTGCCTTTGACATGGAGGATTTAGCCATACCGTGGAATGATCTTAATTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACACCGTGCTGAGTGGAATGGCTCGTTGAAATTGTATGGAAGGAATGAACAAGGGTAG 1812 0.4547 MEMPARRSNYTVLSQVPDDPFSYAAGGSAPSTSSDGKASRGGKLDRGLGFDWELVGDHRLTQQGNNRIGNLYASTGLQRQSSGSSYGESSLSGGGEYYAQTLSTAAASEVDAFGYLHEDGFKVGEVRNHLSEGPGWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPEEASLRLSSSPEALSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRIDSSLEVVLVDRHHDASLRELQNIVQDISCSSITTTEVVDHLSKLVCNRMGGSASAGEDEFLSFWRDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLEREYHVDLIGKPGHLCEPDSLLNGPSSISFCSPLRFPRLKPAQTTIDFRSLAKQYFSDCLSLELFFDNSSAVSISEHFDGKSNERNNLKPISSDINRSSHLPLYLQSALPSTHDQASETYMLCNPPQNFIDSTTVGKYPPPLKHKRPVCIANDDVIEGRRFVEGSQLIPSKPTREVAFDMEDLAIPWNDLNLKEKIGSGSFGTVHRAEWNGSLKLYGRNEQG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01025 603 MobiDBLite consensus disorder prediction 21 42 - -
Vifa3g01025 603 Pfam Ethylene-responsive protein kinase Le-CTR1 192 397 - -
Vifa3g01025 603 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 194 401 - -
Vifa3g01025 603 Gene3D Phosphorylase Kinase; domain 1 557 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01025 Vifa-Chr3 245439223 245443746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01025 1 593 MAP Kinase Kinase Kinase AT5G03730 54.854 2.49e-180 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01025 K14510 - gmx:100800648 866.685