Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00961 ATGGAACTCTCTCTTCTCACCCATCAGCACAATCCTTTCCTCGCCTCCAATCTCTTCACAAGTAACTTCTCTCTTTTCAACTCCAAAGAAACACAAAAAAAACTGTTCAACAAAAATTCAAATAGGTTATTCCCATGTAGCTGTTCACATTCTTCTTCCAGTAGTGCTTCTGTAGAACCAGTTACTGAAGGAAGAAGAGCATTACTCACTTGTTTCCTCACAACATTTGCTGGAGTCTATGCATGTGATGTGGCGGAAGCTGTTAGCACTAGTAGAAGAGCGCTAAGAGGAGCTAAAATTCCTGAGAGTGATTTCAAAACCTTGCCAAATGGTTTGAAGTACTATGATTTGAAGGTTGGAAATGGAGCTGAAGCTGTGAAAGGATCGCGTGTCGCAATTCACTATGTTGCTAAATGGAGGGGAATCACATTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCGAATCTGAGCGAGGAAATGTCCTAAAAGGTTTGGATTTAGGAGTAGAAGGCATGCGAGTTGGAGGCCAGAGGCTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTTCAAGAAATTCCTCCAAATGCAATAATAGAGGTGGATGTTGAATTGCTTGCCATTAAACAAAGCCCATTTGGGACTGCTGTAAAGATTGTAGAAGGCTAA 708 0.4237 MELSLLTHQHNPFLASNLFTSNFSLFNSKETQKKLFNKNSNRLFPCSCSHSSSSSASVEPVTEGRRALLTCFLTTFAGVYACDVAEAVSTSRRALRGAKIPESDFKTLPNGLKYYDLKVGNGAEAVKGSRVAIHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNAIIEVDVELLAIKQSPFGTAVKIVEG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00961 235 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 101 230 - -
Vifa3g00961 235 Gene3D - 84 229 IPR046357 GO:0003755
Vifa3g00961 235 SUPERFAMILY FKBP-like 91 222 - -
Vifa3g00961 235 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 128 222 IPR001179 GO:0003755
Vifa3g00961 235 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 124 219 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00961 Vifa-Chr3 233899069 233900709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00961 128 222 Calmodulin-binding Proteins AT5G48570 41.237 8.93e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00961 - - gmx:100815603 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00961 3 233899069 233900709 Vifa3g00961 3 233899069 233900709 ECH