Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa3g00958 | ATGAGAATAACGGATAGTTCTGAGAATCCTCCACCTGTGACTAGATCTGAGATTCTAGAAGGAAAAGTGAAGGATCATCTATGGAGGAGGATTCCATATTTGAGACCTACTGAATACGAGAGGTCTAGATTGTCTCGCAACCTTCGAATAGTTAATAGAGCATATGGTGGTGTTTTATCTGGAAGAGCTGTTAGGGAAAGGATGATTCGTGCTTTCCTTGTTGAAGAGAAAAATTTTGAAGAAAGTTTTGAAGATACAAAAGACAAAAGAAATCTAGCAACCCATAAACCTCGAGAATCTTTCTCGTTTGAACCCAATAATTTCATCAATAAAATTGTTCCTTCTTGCATCCTGAAACTCATCTCTTCATTCTTCTACCGTCCCATCAACCTTCATGTCCATGTATTTCTTCCTTTGCTGTTGGAGTTCCCCTTATCTCACCGATAG | 447 | 0.387 | MRITDSSENPPPVTRSEILEGKVKDHLWRRIPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEESFEDTKDKRNLATHKPRESFSFEPNNFINKIVPSCILKLISSFFYRPINLHVHVFLPLLLEFPLSHR | 148 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa3g00958 | 148 | Pfam | Ribosomal protein L34e | 29 | 73 | IPR008195 | GO:0003735|GO:0005840|GO:0006412 | |
| Vifa3g00958 | 148 | Gene3D | - | 22 | 98 | - | - | |
| Vifa3g00958 | 148 | PANTHER | 60S RIBOSOMAL PROTEIN L34 | 15 | 80 | IPR008195 | GO:0003735|GO:0005840|GO:0006412 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vifa3g00958 | 31 | 79 | Cytoplasmic Ribosomal Protein Gene Family | AT1G69620 | 81.633 | 3.05e-22 | 84.0 |