Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00958 ATGAGAATAACGGATAGTTCTGAGAATCCTCCACCTGTGACTAGATCTGAGATTCTAGAAGGAAAAGTGAAGGATCATCTATGGAGGAGGATTCCATATTTGAGACCTACTGAATACGAGAGGTCTAGATTGTCTCGCAACCTTCGAATAGTTAATAGAGCATATGGTGGTGTTTTATCTGGAAGAGCTGTTAGGGAAAGGATGATTCGTGCTTTCCTTGTTGAAGAGAAAAATTTTGAAGAAAGTTTTGAAGATACAAAAGACAAAAGAAATCTAGCAACCCATAAACCTCGAGAATCTTTCTCGTTTGAACCCAATAATTTCATCAATAAAATTGTTCCTTCTTGCATCCTGAAACTCATCTCTTCATTCTTCTACCGTCCCATCAACCTTCATGTCCATGTATTTCTTCCTTTGCTGTTGGAGTTCCCCTTATCTCACCGATAG 447 0.387 MRITDSSENPPPVTRSEILEGKVKDHLWRRIPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEESFEDTKDKRNLATHKPRESFSFEPNNFINKIVPSCILKLISSFFYRPINLHVHVFLPLLLEFPLSHR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00958 148 Pfam Ribosomal protein L34e 29 73 IPR008195 GO:0003735|GO:0005840|GO:0006412
Vifa3g00958 148 Gene3D - 22 98 - -
Vifa3g00958 148 PANTHER 60S RIBOSOMAL PROTEIN L34 15 80 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00958 31 79 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 81.633 3.05e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00958 K02915 - jre:109013174 82.4185