Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00929 ATGGACCCTAACCAATATAATTTTCAACAATCTATGTTCCATCTCATACAAAATCAGCAAAATTCTAATCCTCAAAATTCTCAATTTCCCCCACCACCAACAAATTCTACCGTATTTTTTTCGTCACCAAACAACCCAAATATGTATTTTAGACCACAAATAAATACTCATGGGATGAATTTTTCTCATCATGAACCCGAAACACCAAATGGGTTTATGTCCGAACGCCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAAATAATACAATTGATAAAGAACAAAGGCGTCCAGTTAAAAGAAAACCTCGAGAGGTATTCACAAGGGAAGAAGATACACTTATTATGCAATCATGGCTCAATGTTTCAAAGGATCCAATTTCACGAGAAAAGCTACAAGGCCAATTAAAATCTCGATGGCATCGAATAAATAGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCATGGAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGAGGCTTTTAAAAGATGAACCTAAATGGATGGGAGCATCCACTGAAAATTCTTCAAAGAGATCAAAGAATTCTACTAGTGGTGCATACACGACATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCTATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATACAAATGCAACTAAACCTCCTTCTAGTGTTAATTCTGATACAATGACTAAAAGAATGAATTTAATGGAAAATCTAGCACGGCTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTCTGAAGCACGACTTAAGGAGGAAGAAAACAAATTAATAAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATAGTCAGCGTGAATTTCATGAAAAACGGTGTAATAACCTAAAAGAAAAATATGGATGGTAA 1065 0.3587 MDPNQYNFQQSMFHLIQNQQNSNPQNSQFPPPPTNSTVFFSSPNNPNMYFRPQINTHGMNFSHHEPETPNGFMSERQVPQFSTQVGIENNTIDKEQRRPVKRKPREVFTREEDTLIMQSWLNVSKDPISREKLQGQLKSRWHRINSLVQKFVGCYKQAVHGKKSGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKDEPKWMGASTENSSKRSKNSTSGAYTTSPNSETPSSYEFNSSSPMERPMGQKAAKRKGKAKENTNATKPPSSVNSDTMTKRMNLMENLARLKEEENKLVKEKMESEARLKEEENKLIKEKMEFEAMQFIMSDTSKMNDSQREFHEKRCNNLKEKYGW 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00929 354 Pfam No apical meristem-associated C-terminal domain 186 343 IPR029466 -
Vifa3g00929 354 MobiDBLite consensus disorder prediction 204 244 - -
Vifa3g00929 354 Coils Coil 271 319 - -
Vifa3g00929 354 MobiDBLite consensus disorder prediction 204 274 - -
Vifa3g00929 354 PANTHER - 79 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00929 Vifa-Chr3 225906730 225907866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00929 77 292 Glutathione S-transferase Gene Family AT5G41240 29.572 1.40e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00929 - - cam:101493921 331.257