Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00872 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATTCTCAAAATTCTCAAATTTCATCAGTACCACCAAACCCCGCCATATTTTTTCCGTCACCAAATAATCCAAATATGTATCAAAATCCTAATCCTCAAAATTCTCAAGTTCCACCATTTTCTACTCAAGTTGGTGTTGAAAAAGAAGAAAGAGTTCTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAGGATATATGTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGAAGTTAATCAAAAAGCTGAGAGTTTTTGGCATAGAATTGCTGCAAATTATAACCAGTATCGCGGGCAATTGCGAGAAAAGTTAAGTGGTCAATTAAAATGTCGATGGCATCGAATAAATGCGTCAGTTCAAAAATTTGTTGGGTGTTATAGACAAGTTGTCAATGGAAAGAAAAGTGGGACATCAGAGAACGATATCATGGCTGCTGCACATGCTTTTTATGCTCAAGATCAAGGTACAACATTCAATCTTGAGTATGCATGGCGATTGTTAAAAGATGAAGCTAAATGGGGCATCATCGGAGAATCGATTGGAAATTCTTCAAAAATGACACAGACTTCTGCTAGTGGGGCATCATCGGAGATCCCTGATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGACAAAGGAAATTTCAAATGCAACGCAAGATGCAAGGAATAAAAAAGCAGAAACAATGGAAAGACTTGCGCAAAGTAAGGAGGACGAGATAGAATTAAAGGTAATGCAAATCATGATGAAAGACACTTCTACTATGAACGAAAGTCAACGAGATATTCATGAAAAATATTGTAATAAAATGAAAAAAAATATGGATTGTAGTTAG 972 0.357 MDPNHFHYQQAMFNFMQNYQNPNSQNSQISSVPPNPAIFFPSPNNPNMYQNPNPQNSQVPPFSTQVGVEKEERVLVKKKSREQFTRDEDICLIQSWLNVSKDPIVEVNQKAESFWHRIAANYNQYRGQLREKLSGQLKCRWHRINASVQKFVGCYRQVVNGKKSGTSENDIMAAAHAFYAQDQGTTFNLEYAWRLLKDEAKWGIIGESIGNSSKMTQTSASGASSEIPDTPSSYEFNSSSPMERPMGQKAAKRKGKTKEISNATQDARNKKAETMERLAQSKEDEIELKVMQIMMKDTSTMNESQRDIHEKYCNKMKKNMDCS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00872 323 Coils Coil 264 284 - -
Vifa3g00872 323 MobiDBLite consensus disorder prediction 213 244 - -
Vifa3g00872 323 PANTHER - 67 318 - -
Vifa3g00872 323 Pfam No apical meristem-associated C-terminal domain 186 307 IPR029466 -
Vifa3g00872 323 MobiDBLite consensus disorder prediction 213 283 - -
Vifa3g00872 323 MobiDBLite consensus disorder prediction 247 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00872 Vifa-Chr3 215873619 215874590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00872 52 256 Glutathione S-transferase Gene Family AT5G41240 35.000 6.78e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00872 - - psat:127115199 441.425