Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00838 ATGCTTGGTAAAAAGATGGTATCATTGAAGAAACTAGCCAAGAAGGTAAAGCCTAGTAGTAGTGGAGGTGAAACTAACACTGATCCTCCACACCATGAGTGCTTGTTGAAGGGGTATGAAGAAGAGTTTTGTACAAGCACAACTCCAACTGGTTATTTTGCAATTTATGTTGGTGATGAGCATCAAAGATTTGTGGTTCCTACAAGCTATCTTTCTCACCCTTTGTTCAAGATGCTGCTTGAGAAATCTTACAATGAGTTTGGTTTTCAGCAAAGGAATGGCTTGGTTGTTCCTTGTAGTGTGGATGCATTTCAAGAGGTTGTGAATGCTATTGAATGTAACAATGGCAAGTTTCATTTAGGGAAGATTTTTCATGATTTTGTTTGA 387 0.3824 MLGKKMVSLKKLAKKVKPSSSGGETNTDPPHHECLLKGYEEEFCTSTTPTGYFAIYVGDEHQRFVVPTSYLSHPLFKMLLEKSYNEFGFQQRNGLVVPCSVDAFQEVVNAIECNNGKFHLGKIFHDFV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00838 128 Pfam Auxin responsive protein 27 110 IPR003676 GO:0009733
Vifa3g00838 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00838 Vifa-Chr3 202133729 202134115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00838 40 119 Calmodulin-binding Proteins AT5G20810 47.059 5.93e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00838 K14488 - gmx:100790208 200.29