Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00825 ATGTCTCCATTTACTAAAAAAATGTTTTTGCTATGTGTGTTGACATTGTTATCAGCACACAATAGTTTTGGAGTGCGTGTGAGTGTTCTTAACAACTTAGAACAAAATATGGACTTAACCATTCACTGCAAATCTGCAGATACTGATTTGGGAGCTCAACTTCTTCATCATGGTGCTAGTTTTGGTTGGAGTTTTCAAATTAGCATTATTGGCCACACACAATACTTTTGTTCCTTTCAATGGAATGGAGGGTTTCATTATTATGACATATACATAGCAAGCAGGGATTATCATGTATGTGATCCTTGCAATTGGTATATTACAAAATCAGGACCATGTAGGGTTCTGGCTCCAGGTTCTGCTGTTTGTGACTTTTGGAAAAAGTAG 387 0.3669 MSPFTKKMFLLCVLTLLSAHNSFGVRVSVLNNLEQNMDLTIHCKSADTDLGAQLLHHGASFGWSFQISIIGHTQYFCSFQWNGGFHYYDIYIASRDYHVCDPCNWYITKSGPCRVLAPGSAVCDFWKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00825 128 PANTHER - 26 114 IPR010264 -
Vifa3g00825 128 Pfam Plant self-incompatibility protein S1 27 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00825 Vifa-Chr3 197029634 197030020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00825 15 115 Carbohydrate Esterase AT3G16970 34.286 2.92e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00825 - - cam:101513244 155.606