Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00814 ATGGTGAAGAAAATGAAGCTTCTCTCTTTTTTCAAAAACAAAGATAAAAAATCATCTTCACCAAGGGCTTGTCTACAATGTAGCTACAAACCAAAAACCCTATCTTTCAGAGAAAACCAACATATTCCAGAAACTTCTGAATGCATAGCACCAGAATTTCCTTCTGAGGATTTTAGTAGTAATTCAGTTGAAACTGTGAATATTGATGGTTTAAGTCCGGGTCGATTTTTCTTCGATCCGGACGAAACAAGATCAATATTTAAGGCGAAAGAAAACATTAATGCATGTGATGGATTAATAACTAGGGCTAGCAGGAATGATGATAATAATAATAATGAAAGTTTGTCATTACCATTTGAAAACACGGTTGAGTTTGCGATGGATTCGCAAAACCCTATAGAAGATTTCAAAGAATCTGTTGTGGAGATGGTGGAGGCTCATGGTGTTAACGATTGGGAAAGCTTGGAGAAGCTTTTGAGTTGGTATTTGGAAGTTAATGAGGAAAGAAATCATGAGTTTGTTATCGATGCTTTTTTTGATTTATTTGTTAATAATCATGATTCATCTGATTCTTCACCTTTCTCGATTCATAGTTCTTCTTCTTTTGATTCTTCTTGGAGCACAGCTCGTGTTTCATGTTATAGTTCACCTTTGTAA 657 0.3486 MVKKMKLLSFFKNKDKKSSSPRACLQCSYKPKTLSFRENQHIPETSECIAPEFPSEDFSSNSVETVNIDGLSPGRFFFDPDETRSIFKAKENINACDGLITRASRNDDNNNNESLSLPFENTVEFAMDSQNPIEDFKESVVEMVEAHGVNDWESLEKLLSWYLEVNEERNHEFVIDAFFDLFVNNHDSSDSSPFSIHSSSSFDSSWSTARVSCYSSPL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00814 218 NCBIfam uncharacterized plant-specific domain TIGR01568 124 184 IPR006458 -
Vifa3g00814 218 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 184 IPR038933 GO:0045892
Vifa3g00814 218 ProSiteProfiles OVATE domain profile. 125 184 IPR006458 -
Vifa3g00814 218 Pfam Transcriptional repressor, ovate 129 183 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00814 Vifa-Chr3 189412163 189412819 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa3g00814 Ovate 3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00814 - - mtr:25483754 207.608