Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00812 ATGTCTAGCTCCAAAAAGAAACTAACCTTAAACTCTGTATCCATAAACCTTGGTTGTGGAACATGTAGAAAACCAAAACTAAGTTCCATATTCAACCCAAAACTAAAACACAAAAAACCTCACATTCATAACAACTCTTCATCTTCTTCTTCAAATTCAAATTCAAACCCTTGGAGACAACGAGCCAGAGACAATACCGAAACATCAAGTAGCACTAGCAACACTACTATACCAACAACAAAAACATCATTCGACTCAGACAAATCATCATCATCATCATCATCCCTGAAAGGCTTTGGAAGAGTCGGAAACGAAGGAGTAGCGGTTGAGAAAGATTCAGATGATCCTTATCTTGATTTTCGTCATTCTATGTTACAAATGATATTGGAGAATGATATATGTTGTAAGGATGATCTTAGAGGGCTATTGAACTGTTTTCTTGAGCTGAATTCGGTGGAACATCATGGGATTATTATAAGGGCTTTTACTGAGATTTGGAATGGAGTTTTTTCAGTTAAGTCTGGTTTTTCACCTGGGTTTCATCTCAAACCGTAA 555 0.3658 MSSSKKKLTLNSVSINLGCGTCRKPKLSSIFNPKLKHKKPHIHNNSSSSSSNSNSNPWRQRARDNTETSSSTSNTTIPTTKTSFDSDKSSSSSSSLKGFGRVGNEGVAVEKDSDDPYLDFRHSMLQMILENDICCKDDLRGLLNCFLELNSVEHHGIIIRAFTEIWNGVFSVKSGFSPGFHLKP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00812 184 MobiDBLite consensus disorder prediction 36 99 - -
Vifa3g00812 184 MobiDBLite consensus disorder prediction 44 99 - -
Vifa3g00812 184 ProSiteProfiles OVATE domain profile. 109 168 IPR006458 -
Vifa3g00812 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 36 171 IPR038933 GO:0045892
Vifa3g00812 184 Pfam Transcriptional repressor, ovate 113 169 IPR006458 -
Vifa3g00812 184 NCBIfam uncharacterized plant-specific domain TIGR01568 107 167 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00812 Vifa-Chr3 188982585 188983139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa3g00812 Ovate 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00812 - - tpra:123903281 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00812 3 188982585 188983139 Vifa3g00812 3 188982585 188983139 ECH