Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00792 ATGGTAGAAGCACAAAACCACAGCCTTAGCAAAAGACGCTGTTGCTGTTGCTGCATCTTCAACAAAGTTTGGAAGTTTCTCTTAGCAACAATCATCTTCGTTGCTCTCATAATGCTCATTTTATTCCTCGTCATCAAACCACGAGCCTTCAAATTCAGTGCCAATGAAGCCAAACTCACCCAATTCAACTACACCACCAAAACCAACACCCTCCATTACAACCTCGTACTCAACTTTACATCACGTAACCCAAACAAAAACCTCAACATCTACTACGATGAAATTAACGGACACGTATCCTACGAAGGAACAAGGTTTGCTTCATCAAACGTTATAACAAGGTTAAATTCATTCCGTCAATACACGAACAGCACCAACCGAATAACCAGTGTTTTCTCTGGGAAACGTGTTGTTGTTTTTGATCGTGATCAAGTTTCTGATTTTATCCGCGATAAGAAAAATCGAGTTTTTCGTATTGATGTGAAATTATATTTTAAACTCAGATTTGTGCTTGATGATTTTTACGTTGGACATAGTAAGGGTAACATTAAATGTGGACTTTATGTTCCTTTTGATTCTAATGGGACTAAGGTCATAAATGCATTTCAACCCACCAAGTGTGATGTTAATTTCTGA 636 0.3789 MVEAQNHSLSKRRCCCCCIFNKVWKFLLATIIFVALIMLILFLVIKPRAFKFSANEAKLTQFNYTTKTNTLHYNLVLNFTSRNPNKNLNIYYDEINGHVSYEGTRFASSNVITRLNSFRQYTNSTNRITSVFSGKRVVVFDRDQVSDFIRDKKNRVFRIDVKLYFKLRFVLDDFYVGHSKGNIKCGLYVPFDSNGTKVINAFQPTKCDVNF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00792 211 Pfam Late embryogenesis abundant protein 79 166 IPR004864 -
Vifa3g00792 211 PANTHER OS05G0367900 PROTEIN 12 191 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00792 Vifa-Chr3 177006260 177006895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00792 44 191 SNARE and Associated Proteins AT1G32270 27.027 6.56e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00792 - - tpra:123903297 258.07