Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00761 ATGTTCGCTACTCATCGCCATAGACCCATTCTCTATCTCAAAGCCTTATCTTCTCCACCAAACCCTAACCCTAACCCTAGTTTTCACCATTTCTGCACCGCCTCTTCCAATTCAACCCCATTTCCAGTCTCCTACCTCATCCACAATCTCGGCTTCTCCCCACAATCTGCTTCCAAACTTTCTTCCACTTACAATCTTCGTTTCAAGACTAACCAAAACCCTGATTTAGTTCTCAATTTCTTTAGAAACCATGGTGTATCAGATTCCCAACTACGCAACATGGTCGTCAAGACACCATGGCTACTTTCCTGTGACCCCTCCATAAGGGTCTTTCCAAAGTTTCAATTTTTCCTCTCTAAAGGCGCTTCTACCTCCGACATTGTTCACCTTGTCACTAAGTTCCCCATGATCCTCTCTCCAAGCCTGGAGAATCATATAGTCCCAACCTATGAATTTCTCACTAGATTCTTCCAATCTCACAAAGACATTGTCACTCATGCAATTCAAAATCCTCTTTTATTTTGTTATCGTAATGTGTTACTTAACGTTAGAATGTTGATTGAGTATGGAGTTCCAGATTCCTGCATTGCAAGATTGCTTCAAGTCAATAGCAAGGTACTCAACACAAATGAACTTCTGAAGTTGGTTGAGGAATTAAAGGATTTGGGGTTTAATCCTTCACAATCAACTTTCTCAATAGCATTGCATGCCAAAAGAACAGTAGTCAAAGCCAGGTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCCGATCAAGATGTTGTTGAAGCATTTCGAAAGCAGCCTCAGTGTATGTTAGCATCCCTTGATAAAATAAATTTAGTCATGAGCTTTTGGGTCGATCAGTTGGGTTGGGATGCCATGGCCATTGCCAAAGTACCAAGGGTTTTGTCAGCCAGTATGGAGAGAAGGATCATACCAAGGGCCTCAGTTGTGCAATATCTTCTGAAGAAAGATTTGCTAAAAAAGAAAGCAAGTTTAACTGCTCCATTTATAGTCGTCGATAAGACATTCCTTGACAAATATATAATGCCTTTTAAGGAGGACTCTTCTTATCTCTTAAAGCTTTATGAAGAAAAACTGAATCTTGCACACAACAAGGACAACAAAGATGGCATGATATGA 1152 0.4054 MFATHRHRPILYLKALSSPPNPNPNPSFHHFCTASSNSTPFPVSYLIHNLGFSPQSASKLSSTYNLRFKTNQNPDLVLNFFRNHGVSDSQLRNMVVKTPWLLSCDPSIRVFPKFQFFLSKGASTSDIVHLVTKFPMILSPSLENHIVPTYEFLTRFFQSHKDIVTHAIQNPLLFCYRNVLLNVRMLIEYGVPDSCIARLLQVNSKVLNTNELLKLVEELKDLGFNPSQSTFSIALHAKRTVVKARWKEKVDAFKKWGWSDQDVVEAFRKQPQCMLASLDKINLVMSFWVDQLGWDAMAIAKVPRVLSASMERRIIPRASVVQYLLKKDLLKKKASLTAPFIVVDKTFLDKYIMPFKEDSSYLLKLYEEKLNLAHNKDNKDGMI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00761 383 Gene3D Transcription termination factor 3, mitochondrial 158 361 IPR038538 -
Vifa3g00761 383 PANTHER CGI-12 PROTEIN-RELATED 42 356 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 Pfam mTERF 246 347 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 Pfam mTERF 78 225 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 SMART mt_12 197 225 IPR003690 GO:0003690|GO:0006355
Vifa3g00761 383 FunFam Mitochondrial transcription termination factor-like 142 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00761 Vifa-Chr3 164185760 164186911 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa3g00761 mTERF 6.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00761 K15032 - mtr:25488156 454.521