Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00738 ATGAACTCAGAAATGTATTTTGCAACCACAATGTTCCTCCTCTTTTTATCATACATTGCTATAACACTATTTCATAGAACAAAAACACATATCAATCTTCCACCAGGGCCTTCACTTCTTACCCTTATCCGAAATGCTTCTGAATTAGGAAAACTAAAACCACAACATTTGTTAGCCAAATATTCCAAAATATATGGACCAATAATGCATTTGAAGTTAGGTCAAATAACGACCTTTGTAATTTCATCACCAGAAATTGCACAACAAGTGCTTCAAACTCATGATCTCTTCCTCTCAGACCGAACTATTCCTCAAGCTGTAGCAGTTCTTGATCATCAACATTTTAGCTTACCTTTTATGCCAGCTTGCGATCTTTGGAGAGACCTTAAGAAAATATGTAAAAACCATTTGTTTTCCAGCAAAACACTTGATGCTAGTTATCAACTTAGGTGTAACAAGCTTCAAGACTTTTTATGTGATATTGATAGAAGCAGTAAAAGGGGTGAAGCAGTAGATATTGGAAGAGCTGCTTTTAAGACTACATTGAACTTTTTGTCAAACACTTTTTTTTCTATGGATTTTGCTAATTCTGCTGGTGAAACTGATGAGTATAAAGATATAATTGAAAATCTTGTGAGAGTCATAGGAACACCAAACTTGGTTGATTTTTTTCCTGCTTTAAGGATGTTTGATCCACAAGGTATTAAAGGAATATCAACTACTTATCTTGAAAAGTTGTTGCAAATTATTGATTCCTATACTACCAACAGATTGAAGTTAAGGGAAAGCGAAAATTACATCCCAAAGGATGACATGTTAGACATGCTTCTGAACATCTCTCAAGATAATGGGCAAAAGATGGACAACATAAAGATTAAACATTTGTTTCTGGATTTATTTGTCGCGGGGACTGATACAACTTCCTACACTATAGAACGAGCCATGGCAGAACTAATTCACAACCCACATGTAATGACAAAAGCTAAAGAAGAGCTTGAACAAGTAATTGGTATAGGAAATACAATTGATGAATCGGATATTACTAAACTCCCATATTTGCAAGCAATAGTAAAAGAAACGTTACGATTGCATCCATCAGCTCCACTTTTACTACCAAGAAAAGCGAGGATAGATGTAAAAATTTGTGGATACACTATTCCACAAGGTTCCCAGATTCTAGTTAATGAATGGGCCATGGGAAGAAATCCTAGCATTTGGGATAATCCAAATATGTTTTTTCCTGAAAGATTTCTTGGATCGGAAATTAATTTCAAGGGCCAATATTTTCAATTCACACCATTTGGTGGTGGGAGAAGAATGTGTCCTGGCATGCCACTTGCTATACGAATGTTACATACGATGTTAGGATCATTGATTAATTCTTTTGACTGGAAAAAGGAAAACAAAGATAGAGACATTGATCAATCATTGCGAGCTATTCCTATTAGAGTAAATAAACTGTAA 1464 0.3497 MNSEMYFATTMFLLFLSYIAITLFHRTKTHINLPPGPSLLTLIRNASELGKLKPQHLLAKYSKIYGPIMHLKLGQITTFVISSPEIAQQVLQTHDLFLSDRTIPQAVAVLDHQHFSLPFMPACDLWRDLKKICKNHLFSSKTLDASYQLRCNKLQDFLCDIDRSSKRGEAVDIGRAAFKTTLNFLSNTFFSMDFANSAGETDEYKDIIENLVRVIGTPNLVDFFPALRMFDPQGIKGISTTYLEKLLQIIDSYTTNRLKLRESENYIPKDDMLDMLLNISQDNGQKMDNIKIKHLFLDLFVAGTDTTSYTIERAMAELIHNPHVMTKAKEELEQVIGIGNTIDESDITKLPYLQAIVKETLRLHPSAPLLLPRKARIDVKICGYTIPQGSQILVNEWAMGRNPSIWDNPNMFFPERFLGSEINFKGQYFQFTPFGGGRRMCPGMPLAIRMLHTMLGSLINSFDWKKENKDRDIDQSLRAIPIRVNKL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00738 487 FunFam Cytochrome P450 76C4 25 480 - -
Vifa3g00738 487 Gene3D Cytochrome P450 24 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 Pfam Cytochrome P450 34 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 469 - -
Vifa3g00738 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vifa3g00738 487 SUPERFAMILY Cytochrome P450 34 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00738 487 CDD CYP76-like 62 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00738 Vifa-Chr3 157424914 157426484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00738 10 487 Cytochrome P450 AT2G45550 41.296 5.82e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00738 - - gmx:100792017 618.616