Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00736 ATGTTCCTCCTCTTTTTATCATACATTGCTATAACACTATTTCATAGAACAAAAACACATATCAATCTTCCACCAGGGCCTTCACTTCTTACCCTTATCCGAAATGCTTCTGAATTAGGAAAACTAAAACCACAACATTTGTTAGCCAAATATTCCAAAATATATGGACCAATAATGCATTTGAAGTTAGGTCAAATAACGACCTTTGTAATTTCATCACCAGAAATTGCACAACAAGTGCTTCAAACTCATGATCTCTTCCTCTCAGACCGAACTATTCCTCAAGCTGTAGCAGTTCTTGATCATCAACATTTTAGCTTACCTTTTATGCCAGCTTGCGATCTTTGGAGAGACCTTAAGAAAATATGTAAAAACCATTTGTTTTCCAGCAAAACACTTGATGCTAGTTATCAACTTAGGTGTAACAAGCTTCAAGACTTTTTATGTGATATTGATAGAAGCAGTAAAAGGGGTGAAGCAGTAGATATTGGAAGAGCTGCTTTTAAGACTACATTGAACTTTTTGTCAAACACTTTTTTTTCTATGGATTTTGCTAATTCTGCTGGTGAAACTGATGAGTATAAAGATATAATTGAAAATCTTGTGAGAGTCATAGGAACACCAAACTTGGTTGATTTTTTTCCTGCTTTAAGGATGTTTGATCCACAAGGTATTAAAGGAATATCAACTACTTATCTTGAAAAGTTGTTGCAAATTATTGATTCCTATACTACCAACAGATTGAAGTTAAGGGAAAGCGAAAATTACATCCCAAAGGATGACATGTTAGACATGCTTCTGAACATCTCTCAAGATAATGGGCAAAAGATGGACAACATAAAGATTAAACATTTGTTTCTGGATTTATTTGTCGCAGGGACTGATACAACTTCCTACACTATAGAACGAGCCATGGCAGAACTAATTCACAACCCACATGTAATGACAAAAGCTAAAGAAGAGCTTGAACAAGTAATTGGTATAGGAAATACAATTGATGAATCGGATATTACTAAACTCCCATATTTGCAAGCAATAGTAAAAGAAACGTTACGATTGCATCCATCAGCTCCACTTTTACTACCAAGAAAAGCGAGGATAGATGTAAAAATTTGTGGATACACTATTCCACAAGGTTCCCAGATTCTAGTTAATGAATGGGCCATGGGAAGAAATCCTAGCATTTGGGATAATCCAAATATGTTTTTTCCTGAAAGATTTCTTGGATCGGAAATTAATTTCAAGGGCCAATATTTTCAATTCACACCATTTGGTGGTGGGAGAAGAATGTGTCCTGGCATGCCACTTGCTATACGAATGTTACATACGATGTTAGGATCATTGATTAATTCTTTTGACTGGAAAAAGGAAAACAAAGATAGAGACATTGATCAATCATTGCGAGCTATTCCTATTAGAGTAAATAAACTGTAA 1434 0.3494 MFLLFLSYIAITLFHRTKTHINLPPGPSLLTLIRNASELGKLKPQHLLAKYSKIYGPIMHLKLGQITTFVISSPEIAQQVLQTHDLFLSDRTIPQAVAVLDHQHFSLPFMPACDLWRDLKKICKNHLFSSKTLDASYQLRCNKLQDFLCDIDRSSKRGEAVDIGRAAFKTTLNFLSNTFFSMDFANSAGETDEYKDIIENLVRVIGTPNLVDFFPALRMFDPQGIKGISTTYLEKLLQIIDSYTTNRLKLRESENYIPKDDMLDMLLNISQDNGQKMDNIKIKHLFLDLFVAGTDTTSYTIERAMAELIHNPHVMTKAKEELEQVIGIGNTIDESDITKLPYLQAIVKETLRLHPSAPLLLPRKARIDVKICGYTIPQGSQILVNEWAMGRNPSIWDNPNMFFPERFLGSEINFKGQYFQFTPFGGGRRMCPGMPLAIRMLHTMLGSLINSFDWKKENKDRDIDQSLRAIPIRVNKL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00736 477 FunFam Cytochrome P450 76C4 15 470 - -
Vifa3g00736 477 Pfam Cytochrome P450 24 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 SUPERFAMILY Cytochrome P450 24 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Vifa3g00736 477 Gene3D Cytochrome P450 14 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00736 477 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 459 - -
Vifa3g00736 477 CDD CYP76-like 52 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00736 Vifa-Chr3 157375636 157377176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00736 1 477 Cytochrome P450 AT2G45550 41.379 5.29e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00736 - - gmx:100792017 615.92