Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00691 ATGGACAAAAAAATCATTGATAGAGAAACACATGACTTAATGAATGTTGATTCATTCTCTCAACTTCCCTTCATCCGCCCTCCACCTAAAGAAAAAGGCATCCGCCTCTTCGGCATCGAGTTCGGCGGCCGAGCGGCCGCTGATGACATCGACGACTCCTCGGAGTCTCTCGAAACAACATTCGAGGCTGAAAACAACAACACCAACAAAGACACCAACACTAACACCAACAACAGCAACAACAACAGCAGTAACAACATGGAAAACAACAGAAGATTTGAATGTCATTACTGTTGTAGAAACTTTCCAACTTCACAAGCTTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGTCAACATGCAAAACGACAACACCTTCAATCAACCATGGTACATGCTACATCTTTCTCTGATCCACATCTCTACCATCACCATCATCAACAACAACAGCATCCTCTCTACAGATTCACATCTTCCTCACCATCCTCATTATCATCATCACCTTCTTATCCAACATGGAACTCAAACTCAGCCACTGCAAGATTCTATAACCTTCCAACTTCTTCATACTCTCAACAACCTATCAATGGTAGTCCTTTAGCTTTTTGGAGAATCCCAAACGCCACCATCCAGAGTAACCCTAGTTTCAACTATGAACGTCCTTTGCCTTTACTTGCTTCCGAGGAAACAGCGAATCAATCACAGGACGGATTCGCTCATGGAGTTCGATCTACCGTTTCTCATAATCGCTACGTTTATGATACTAAACGTAGCGACCATGTTAGTTTAGATCTTCATCTCTAA 807 0.4263 MDKKIIDRETHDLMNVDSFSQLPFIRPPPKEKGIRLFGIEFGGRAAADDIDDSSESLETTFEAENNNTNKDTNTNTNNSNNNSSNNMENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATSFSDPHLYHHHHQQQQHPLYRFTSSSPSSLSSSPSYPTWNSNSATARFYNLPTSSYSQQPINGSPLAFWRIPNATIQSNPSFNYERPLPLLASEETANQSQDGFAHGVRSTVSHNRYVYDTKRSDHVSLDLHL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00691 268 MobiDBLite consensus disorder prediction 142 172 - -
Vifa3g00691 268 MobiDBLite consensus disorder prediction 48 87 - -
Vifa3g00691 268 MobiDBLite consensus disorder prediction 152 172 - -
Vifa3g00691 268 SUPERFAMILY beta-beta-alpha zinc fingers 89 121 IPR036236 -
Vifa3g00691 268 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Vifa3g00691 268 MobiDBLite consensus disorder prediction 108 129 - -
Vifa3g00691 268 PANTHER ZINC FINGER PROTEIN GIS 1 268 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Vifa3g00691 268 MobiDBLite consensus disorder prediction 59 87 - -
Vifa3g00691 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 120 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00691 Vifa-Chr3 138402144 138402950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00691 1 268 C2H2 Transcription Factor Family AT3G58070 38.571 9.13e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00691 - - gmx:100806594 239.965