Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00566 ATGGAGATTATTCAAGAATACATAGCAATCTTTTTAATTTTACTATCCTCCACCATATTGGTCAAATCCATATTCACCAAATCAAAGCTTCACCTACCACCTAGTCCATTAGCCTTACCAATAATTGGACACTTCCATTTACTACTAAAGCAACCTCTTCATAGAGTAACTCACAATCTCTCAAACCGTTATGGACCCATCATTCAAATATATCTTGGATCCACTCCCATGATATTTGTTTCCTCGTCAGAAATAGCAAAACAAATATTCAAAACCAATGAATCTTTGTTCTGGAACCGACCTTCAAATATGGCCATCAACTATCTAACTTACAATTCTTCTGATTTAGCATTTGCACCTTATGGAACCTACTGGAAGTTCATGAAGAAACTTTGCATGTCAGAGCTTCTCAATGGGAAGATGCTTGATCAACTCTTTCCCATAAGACAAGAGGAGATTAACAGATTTTTGCAGATGATTATACAAAAATCAGAAGTAAATGAATCTGTGAATCTCACTGATGAGTTTTTGAAACTGACAAATAGTATAGTAATGAAAATGGCAATAGGAAAAAGCTGTTTTAAAGAAGATGATGAAGCTTACAAAGTGACTGAAAGAGTGAGAGAGTCTGCTATGTTGAGTGGAATGTTTAACTTGGCTGATTATTTTTGGTTTTGCAAGAGATTTGATGTCCAGGGAATTAAGAAGAGGTTAAAGGATGTTCATGATAGGTTTGATACAATGATGGAAACTATTGTCAAGGAGCATGAAGATTGTAGAAGTAAATCAAAAAGAGAAGAGGGTGTAAAGGATGTGTTAGATGCTCTTTTGAGTATTTATGAAGATCCAAGCTCTGAACTCAAAATAACTAGAGATAACATCAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACCGCTGTTACTCTAGAATGGTCATTGGCAGAACTAATTAACCATCCAACAGTAATGGAGAAAGCAAGGAAAGAGATTGAAACAATGATTAGAAAGGATAAAATAGTAACTGAATCAGATATATCTTATCTTCCTTATCTCCAAGCCATAGTGAAGGAAACACTAAGACTTCATCCTCCATCTCCATTTATATTGAGAGAGTCAACTGAAAACTGCGTAATATCTGGATATGATATCCCAACAAAAACTCGGGTTTTCACTAATGTGTGGGCTATTGGAAGAGATCCAAGGAATTGGGACAACCCTCTTGAGTTTAAGCCAGAAAGGTTTATTAATGATGAAAAAGAGAGTAATGTTGTTGAAGTTAGGGGACAACATTATAAGCTTTTGCCTTTTGGGAGTGGAAGAAGAATGTGTCCTGGAACTTCATTAGCACTAAATGTGGCTCACACCACTCTTGCAAATATGATTCATTGCTTTGAATGGAAGATTGAAAATGGAGGGAATGCTTGTGTTGACATGAAAGAGGGTCCTTCATTTATTCTTTCAAGGGCTCAGCCCCTTATATGCTTCCCAATATCAAGATTAGTCCCATTTCATTATATATGA 1533 0.3614 MEIIQEYIAIFLILLSSTILVKSIFTKSKLHLPPSPLALPIIGHFHLLLKQPLHRVTHNLSNRYGPIIQIYLGSTPMIFVSSSEIAKQIFKTNESLFWNRPSNMAINYLTYNSSDLAFAPYGTYWKFMKKLCMSELLNGKMLDQLFPIRQEEINRFLQMIIQKSEVNESVNLTDEFLKLTNSIVMKMAIGKSCFKEDDEAYKVTERVRESAMLSGMFNLADYFWFCKRFDVQGIKKRLKDVHDRFDTMMETIVKEHEDCRSKSKREEGVKDVLDALLSIYEDPSSELKITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELINHPTVMEKARKEIETMIRKDKIVTESDISYLPYLQAIVKETLRLHPPSPFILRESTENCVISGYDIPTKTRVFTNVWAIGRDPRNWDNPLEFKPERFINDEKESNVVEVRGQHYKLLPFGSGRRMCPGTSLALNVAHTTLANMIHCFEWKIENGGNACVDMKEGPSFILSRAQPLICFPISRLVPFHYI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00566 510 Pfam Cytochrome P450 33 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vifa3g00566 510 CDD CYP93 65 500 - -
Vifa3g00566 510 FunFam Cytochrome P450 family protein 25 498 - -
Vifa3g00566 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 496 - -
Vifa3g00566 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 SUPERFAMILY Cytochrome P450 33 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00566 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00566 Vifa-Chr3 104173300 104175068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00566 4 503 Cytochrome P450 AT5G06900 45.743 3.18e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00566 K24188 - gmx:100811919 700.279