Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00565 ATGCAATACTATATCCAACTTTTCTTCCTGTGGCTCCTCTCCACAATAGCAGTTCGTGCCATACTAAATAGAATGAAGAACAAAAACCATCTTACTCCACCATCCCCTCCATCACTACCTATCATTGGACACCTTCACCTTATATCTAAACTACCTCATCAAAGTTTTCACAAGCTCTCAACACACTATGGTCCCATAATCCAAATTTTCCTTGGATCTAAGAGATGTATAGTAACTTCAAGTCCAGAAATAGCAAAGGAGTTTCTTAAAACCAATGAAACTTACTTCTCCAATCGTTTCAGAAGTGCTGCAGTTGACTACCTTTCATATGGCTCAAAGGGTTTCCTGTTTGCTCCATATGGTGACTATTGGAAGTTCATGAAGAAGATGTGCATGTCAGAGCTTCTTGGTGCAAGAACACTTGATCATTTCCTTCCTTTAAGGCAACAAGAGACTTTGAGGTTTGTGAGACTCTTGCAGAAGAAAGGGGAAGCCGGTGAGGCAGTTGATGTCGGCGGCGAGCTCTTGACACTTACAAACAGCACTATATCAAGGATGGCTATGAGAAAAATTTGTTCTGAGAATGATAGTGATGCTGAAGTAATTAGGAAGATGGTGAGAGATGCGGCAGAGCTAGGAGGGAAGTTTAATGTGTCTGATTATATTTGGTTTTGTAAGAATTTGGATTTGCAGGGAATGAACAAAAGGCTTAAAGGGATTATGGAGAGGTTTGACACAATGATGGAGAGGGTGATAAGGGAGCATCAAGAAGAAAGGATGAAAAGAATGGAAAAGGGTGAAGATGATCATGTTACGGATCTACTTGATATTTTGTTGGAAGTTCATGAAAATGAGAACGGTGAAATAAAGTTCAGCATGGAGAATGTGAAGGCTTTCATTTTGGATTTATTTATGGCAGGAACAGACACATCTGCTACAACAATTGAATGGGCTATGGTTGAGTTAATAAACAACCCACATGTGATGGAAAAAGCAAGACAAGAGATTGATTTAATAACACAAAAAAGTAGATTAATACAAGAATCAGATCTTCCCGAGCTTCCATACTTGCAAGCAATAGTAAAAGAAACCCTAAGAATCCACCCTACAGCACCAATTATAGGGAGACAAACATCTGAAAATTGTGTTGTTTATGGTTATGATGTTCCAGCAGAGACCATTTTATTTCTGAATTTATGGTCAATGGGAAGGGACACTAAATTGTGGGAAAACCCACTTGAGTTCAAGCCAGAGAGGTTTATGAGTGAAGATATTAAGTTTGATGTGAGAGGACAAAATTTTCAATTTATGCCGTTTGGAACTGGAAGAAGGGCTTGTCCTGGAACTTCATTAGCACTTCAAGTTGTTCCAACAAATCTTGCTGCTATGATTCAATGTTTTGAATGGAAGGTTGATGGTGATGGAAAAGTTAACATGGAAGAGAAACCTGCTATGACACTTCCTAGGGCTCATCCTTTGATGTGTGTTCCTATTACTCGTTTTAATTGCTTCTCTTTAGGTGACTAG 1527 0.3897 MQYYIQLFFLWLLSTIAVRAILNRMKNKNHLTPPSPPSLPIIGHLHLISKLPHQSFHKLSTHYGPIIQIFLGSKRCIVTSSPEIAKEFLKTNETYFSNRFRSAAVDYLSYGSKGFLFAPYGDYWKFMKKMCMSELLGARTLDHFLPLRQQETLRFVRLLQKKGEAGEAVDVGGELLTLTNSTISRMAMRKICSENDSDAEVIRKMVRDAAELGGKFNVSDYIWFCKNLDLQGMNKRLKGIMERFDTMMERVIREHQEERMKRMEKGEDDHVTDLLDILLEVHENENGEIKFSMENVKAFILDLFMAGTDTSATTIEWAMVELINNPHVMEKARQEIDLITQKSRLIQESDLPELPYLQAIVKETLRIHPTAPIIGRQTSENCVVYGYDVPAETILFLNLWSMGRDTKLWENPLEFKPERFMSEDIKFDVRGQNFQFMPFGTGRRACPGTSLALQVVPTNLAAMIQCFEWKVDGDGKVNMEEKPAMTLPRAHPLMCVPITRFNCFSLGD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00565 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vifa3g00565 508 Gene3D Cytochrome P450 18 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 494 - -
Vifa3g00565 508 FunFam Cytochrome P450 family protein 24 495 - -
Vifa3g00565 508 Pfam Cytochrome P450 33 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 SUPERFAMILY Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00565 508 CDD CYP93 64 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00565 Vifa-Chr3 103176972 103179010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00565 1 500 Cytochrome P450 AT5G06900 46.215 5.37e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00565 K24188 - gmx:100805931 723.776