Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00563 ATGATAGATGAAGCAGCGGCAAAATTCTTACAGCAAGGTTGTGATGGATCAATATTACTAGATGGTGGTGCTGATACTGAAAAGTTTGCTTTTCCTAATGTGAACTCTGTTAGAGGATTTGATGTTATTGATACAATCAAAACTTCAGTGGAGAGACGAAGAGATGGATCAGTCTCAAATGCATCTCTAGCAAATGTGGTTCTTCCTTCTCCATTTGATCCACTAGCTACTATTGTTTCAAAGTTTAATAATGTAGGACTCAATCTCACATATGTTGTTTCTTTATCCGGTGCTCATACAATTGGGAGAGCAAGGTGTGCACTATTTAGCAACAGATTATTCAATTTTTCTAGAACGGGTTCACCGGACAGTACACTAGACACTTCCATGCTTTCTGACCTACAAAATCTCTGTCCTCAAACCGGTGATGGAAACACGACTGCTGTTCTTGATAGAAACTCATCTGATGCATTTGACAATCATTACTATAAGAACTTGCTCAACGGAAAGGGTCTTCTAAGTTCTGATCAGATTCTATGGGATCTCCCTTTGGAGGAAAATCTTCAAAATTATCCAAAATGCAGAGGCATTCCTGAAAATGACTGGGCTGTTTATGTTCAATATAGGCGGAAAGAAAAAACACAGAAAATATCCCAAAAAAATTCCCAAAATAGAGCAAAATTGAAGGCTCCGCATACACTCGGATCTAAGTCGCTTGCAAGGAAGAAACATGAGTTGGAAATGAGAGATGGACGAACATACAGCAGAGGAGAAATGTATGCAGTTTCTCATAAAAAGCCTAACGGGTCATTTATCAATGAAGATGCATACAACAATAATGTAAGTACAAGTTAA 855 0.3813 MIDEAAAKFLQQGCDGSILLDGGADTEKFAFPNVNSVRGFDVIDTIKTSVERRRDGSVSNASLANVVLPSPFDPLATIVSKFNNVGLNLTYVVSLSGAHTIGRARCALFSNRLFNFSRTGSPDSTLDTSMLSDLQNLCPQTGDGNTTAVLDRNSSDAFDNHYYKNLLNGKGLLSSDQILWDLPLEENLQNYPKCRGIPENDWAVYVQYRRKEKTQKISQKNSQNRAKLKAPHTLGSKSLARKKHELEMRDGRTYSRGEMYAVSHKKPNGSFINEDAYNNNVSTS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00563 284 Gene3D - 7 69 - -
Vifa3g00563 284 Gene3D Peroxidase, domain 2 70 203 - -
Vifa3g00563 284 PRINTS Haem peroxidase superfamily signature 151 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g00563 284 PRINTS Haem peroxidase superfamily signature 91 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g00563 284 FunFam Peroxidase 69 192 - -
Vifa3g00563 284 Pfam Peroxidase 53 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g00563 284 SUPERFAMILY Heme-dependent peroxidases 12 181 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa3g00563 284 Pfam Plant transposase (Ptta/En/Spm family) 200 276 IPR004252 -
Vifa3g00563 284 ProSiteProfiles Plant heme peroxidase family profile. 12 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g00563 284 PANTHER PEROXIDASE 72-RELATED 12 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00563 Vifa-Chr3 103046956 103049192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00563 13 187 Peroxidase AT5G19890 53.365 4.83e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00563 K00430 - gmx:100814964 253.832