Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00562 ATGGCTGAAATGCAATACTATATCCAACTCTTCTTCTTCTGGCTCCTCTCTGCAACAGCAGTTCTTGCCTTACTAACTAGAAACAAGAACAAGAACAGTCTTACTCCACCATCCCCTCCATCACTACCTATCATTGGACACCTTCATCTAATATCTAAAATACCTCACCAATGTTTTCACGAGCTCTCAATACACTATGGTCCCATAATTCAACTTTTCCTTGGCTCTAAGCGATATGTAATAATCTCAAGTCCAGAAATAGTAAAGGAGTTTCTTAAAACCAATGAAGCTTATTTCTCCAATCGTTTTAGAAGTGCTGCAGTTCACTACTTATCATATGGATCAAAGGGTTTCTTGTTTGCTCCATATGGTGACTATTGGAAGTTCATGAAGAAGATGTGCATGTCAGAGCTTCTTGGGGGAAGAACACTTGATCAGCTCCTTCCCTTGAGGCAACAAGAGACTCTGAGGTTTATGAGGCTTTTGCAAAAGAAAGGGGAAGCTGGTGAGGCTGTTGATGTCGGCGGTGAGCTCTTGACTCTTACCAATAGCATTATATCAAGGATGACTATGAGAAAAGTTTGTTCTGAGAATGATAGTGATGCTGAAGAAATTAGGAAGATGGTGAGAGATGCGGCAGAGCTTGCAGGGAAGTTTAATATATCAGATCATATTTGGTTTTGTAAGAATTTGGATTTGCAGGGAATGAACAAAAGGCTTAAAGGGATTATGGAGAGGTTTGACACAATGATGGACAGGGTGATAAGGGAGCATCAAGAGGAAAGGAAGAAAAAGAAGGAAAAAAGTGAAGGTGGTCATGTTAGGGATCTACTTGATATTTTGTTGGAAGTTCATGAAAATGAGAAGAGTGAAATCAAGTTCAGCAGAGAGAATATCAAAGCTTTCATCTTGCATAAGCCCACCGAGAGAAAGCCTAGTGATATTGCCTACATGGCATCATTAGAGGCAAGTATTCGAAGTGATATTGCCTATGTGGCATCACAACCACACCATGCCAAGCATGTCGATGTGTACACCGACTTGTGGGAATACGTCTTTTGA 1062 0.4058 MAEMQYYIQLFFFWLLSATAVLALLTRNKNKNSLTPPSPPSLPIIGHLHLISKIPHQCFHELSIHYGPIIQLFLGSKRYVIISSPEIVKEFLKTNEAYFSNRFRSAAVHYLSYGSKGFLFAPYGDYWKFMKKMCMSELLGGRTLDQLLPLRQQETLRFMRLLQKKGEAGEAVDVGGELLTLTNSIISRMTMRKVCSENDSDAEEIRKMVRDAAELAGKFNISDHIWFCKNLDLQGMNKRLKGIMERFDTMMDRVIREHQEERKKKKEKSEGGHVRDLLDILLEVHENEKSEIKFSRENIKAFILHKPTERKPSDIAYMASLEASIRSDIAYVASQPHHAKHVDVYTDLWEYVF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00562 353 Pfam Cytochrome P450 36 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00562 353 Gene3D Cytochrome P450 28 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00562 353 SUPERFAMILY Cytochrome P450 36 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g00562 353 PANTHER CYTOCHROME P450 93A3-LIKE 14 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00562 Vifa-Chr3 102912519 102914862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00562 1 305 Cytochrome P450 AT5G06900 44.300 6.66e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00562 K24188 - gmx:100805931 385.571