Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00485 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATTCTCAAAATTCTCAAAATTCTCAAATTCCATCACTACCACTAAACCCCGCCATATTTTTTCCGTCACCAAACAATCCAAATATGTATCAAAATCCTAATCCTCAAAATTCTCAAGTTCCACCATTTTCTACTCAAGTTGGTGTTGAAAAAGAAGAAAGGGTTCTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATATGTCTTATCCAATCACGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGCATAGAATCGCTGCAAATTATAACCAGTATCACGGGCAATTGCGAGAAAAGTTAAGTGGTCAATTAAAATGTCGATGGCATCGAATAAATGCGTCGGTTCAAAAATTTGTTGGGTGTTATAGACAAGCTGTCAATGGAAAGAAAAGTGGGACATCGGAGAACGATATCATGGCTGCTGCACATGCTTTTTATGCTCAAGATCAAGGTACAACATTCAATCTTGAGTATGCATGGCGATTGTTAAAAGATGAAGCTAAATGGGGCATCATCGGAGAATCGATTGGAAACTCTTCAAAAATGACACAGACTTCTGCTAGTGGGGCATCATCGGAGATCCTTGATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGAAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTTCAAATGCAACGCAAGATGCAAGGAATAAAAGAGCAGAAACAATGGAAAGACTTGCGCAAAGTAAGGAGGACGAGATAGAATTAAAGGTAATGCAAATCATGATGAAAGAAACTTCTACTATGAACGAAAGTCAACGAGATATTCATGAAAAATATTGTAATAAAATGAAAAAAATATGGACTGTAGTTAGTACCACTTTAAATTATATGTAA 1002 0.3603 MDPNHFHYQQAMFNFMQNYQNPNSQNSQNSQIPSLPLNPAIFFPSPNNPNMYQNPNPQNSQVPPFSTQVGVEKEERVLVKKKSREQFTRDEDICLIQSRLNVSKDPIVGVDQKAESFWHRIAANYNQYHGQLREKLSGQLKCRWHRINASVQKFVGCYRQAVNGKKSGTSENDIMAAAHAFYAQDQGTTFNLEYAWRLLKDEAKWGIIGESIGNSSKMTQTSASGASSEILDTPSSYEFNSSSPMERPMGQKEAKRKGKAKEISNATQDARNKRAETMERLAQSKEDEIELKVMQIMMKETSTMNESQRDIHEKYCNKMKKIWTVVSTTLNYM 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00485 333 MobiDBLite consensus disorder prediction 216 247 - -
Vifa3g00485 333 MobiDBLite consensus disorder prediction 216 274 - -
Vifa3g00485 333 MobiDBLite consensus disorder prediction 19 65 - -
Vifa3g00485 333 Pfam No apical meristem-associated C-terminal domain 189 310 IPR029466 -
Vifa3g00485 333 Coils Coil 267 287 - -
Vifa3g00485 333 MobiDBLite consensus disorder prediction 19 36 - -
Vifa3g00485 333 MobiDBLite consensus disorder prediction 44 65 - -
Vifa3g00485 333 PANTHER - 70 320 - -
Vifa3g00485 333 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00485 Vifa-Chr3 78864432 78865433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00485 55 259 Glutathione S-transferase Gene Family AT5G41240 34.842 1.58e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00485 - - psat:127115199 432.95