Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00443 ATGGCTAGCAGCAATAAAGAGAGAGAGGAGAAAGACATTGAGTTTATGTTTAACGAGGAGGATGTAGAAGAGGAACATGATATCGAAACGGTAAAGATAGAGGAGACTGACAGTGGTAGCAGTGATGATAATTACGACGAGGATGATGATGGAAACCATGCATTTCAACCTCACTCTTTCACTTCCAACCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACTGCCCCGAGTTTTGGATCATTTCTACGACGACCAAGTTTTATTTACTCAAGTTTTGGCAATCGTTCAAAGAGTAACTCAGACATAGATGAAAAATCTCTCTTTCTATCCGGTCATGAGAAAGGTTCAACGCAAAATCTTGATGGAGAAACGCCTCTTGGTCATGGTTGCAGCTTCACTCAAACAATTTTCAATGGGATTAATGTGATGGTTGGAGTTGGCCTTATATCTGCACCTTATACAGTGAAACAAGCTGGTTGGGTGAGCATCTTGGTGATGACTCTTTTTGCAGTTGTTTGTTGTTATACAGCCTCGCTTATGAGACAGTGCTTTGAAAGTAGAGAAGGACTCATTAGCTACCCAGATATTGGAGAAGCTGCATTTGGTAGATATGGCCGTATTTTTGTATCTATCATTTTGTACACTGAGTTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTATTTCCTGGAACATCCTTAGATTTAGGCGGTCTCCATTTAGATTCAATGCATTTGTTTGGAGTTCTTACTGCACTTATTGTTCTCCCCACGGTTTGGTTGAAGGATCTCCGAGTAATCTCGTATCTATCAGTTGGAGGGATTGTAGCAACAATATTGATTATTATCTGTGTGATATCGGTCGGGACAAGCGTTGGATTCCATCATTCTGGTCCAGTAGTGAATTGGAGTGGCATTCCATTTTCTATTGGTGTCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTAACAAAAAACAATATACCAAAGCATTGATAACATGTTTTGCTTTGTGTATTTTGATATACGGAAGCGTCGCAGTCATGGGATTTCTCACATTTGGCGATACCACTTTGTCTCAGATAACATTGAATATGCCTGCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCATTCACTAAATATCCTTTTTGCATAGAATGA 1245 0.3952 MASSNKEREEKDIEFMFNEEDVEEEHDIETVKIEETDSGSSDDNYDEDDDGNHAFQPHSFTSNQWPQSYKETTDSYTIATAPSFGSFLRRPSFIYSSFGNRSKSNSDIDEKSLFLSGHEKGSTQNLDGETPLGHGCSFTQTIFNGINVMVGVGLISAPYTVKQAGWVSILVMTLFAVVCCYTASLMRQCFESREGLISYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLHLDSMHLFGVLTALIVLPTVWLKDLRVISYLSVGGIVATILIIICVISVGTSVGFHHSGPVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMANKKQYTKALITCFALCILIYGSVAVMGFLTFGDTTLSQITLNMPAGAFASKVALWTTVINPFTKYPFCIE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00443 414 Pfam Transmembrane amino acid transporter protein 135 410 IPR013057 -
Vifa3g00443 414 Gene3D Amino acid/polyamine transporter I 135 407 - -
Vifa3g00443 414 MobiDBLite consensus disorder prediction 1 15 - -
Vifa3g00443 414 PANTHER OS05G0424000 PROTEIN-RELATED 139 404 - -
Vifa3g00443 414 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00443 Vifa-Chr3 68899425 68901286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00443 64 409 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.604 7.04e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00443 K15015 - gmx:100790344 576.63