Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa3g00418 | ATGGAAGCAGAAACGGGTGAAAAAGATATGGTGAGGGCAGTTAGTGATGGAAGGAGGAGGAAGAGTTTTGCAGAGTTGATCGAAAAATCGGCAAGCTTCCATGAGAGAAGCGATGAAGAGGAGGCGAAATGGAAGGCGTTATGGAGGCTTCCAACATATGATAGAATGAGAAAAGTGATTTTAAAGCAAGTTCTTGATAATGGAAAAGCAGAGTATGAAGAAGTTGATATCAACAAGCTTGGAGTAGAGGAAAAGAAGCATCTTTTGGAGAGCATAATAAAGACTGCTGAAATAGACAATGAGAATTTTCTCCAAAAAATGAGAGACAGAATTGATAGGGTAGGAATTGAGATTCCTAAGATTGAAGTCCGGTTTGAGAATCTATCAGTTGAAGGGGATGCATATGATGGAACCAGGGCTTTGCCAACACTAATCAATGCTACCCTCAATATAATTGAAGGACTTTTGGGTTATATCAAGATTTTGGCATTTAAGAAAAGGGTTGTGAAGATTCTCAAAGATGTTAGTGGAATTGTAAAACCATCAAGAATGACTTTATTACTGGGACCTCCAGGTTCAGGAAAAACTACACTGCTTCAGGCACTTTCTGGGAAAATGGACAAGGATCTAAGGGTATCAGGAAGAGTGACTTACAATGGTCATGAGTTGTCAGAATTTGTTCCTCAAAGAACATGCGCTTATATTAGTCAGTATGATCTTCATCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTCTCCGGACGCTGCTTAGGTGTTGGAACAAGGTATGATATGTTGATAGAATTATCAAGACGAGAAAAAGCATCAGGTGTCAAACCAGATCCTGAAATAGATGCTTTCATGAAAGCCACGTCAATGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGGTTGGAAATGTGTTCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCAGGTGGACAAAAGAAGCGTTTAACCACTGGTGAGATGTTGGTGGGACCGGCAAAAGCCCTCTTTATGGATGGAATTTCTACTGGTTTGGATAGTTCTACAACCTTCCAAATTGTCAGGTTTATGAGGCAGATGGTTCATATCATGGATGTCGCTATGATAATCTCACTTCTTCAACCCGCACCAGAAACATATAACCTTTTTGATGACATAGTATTACTTTCAGAAGGTGAGATTGTCTATCAAGGTCCACGTGAGAGTGTTCTAGATTTTTTTCAAAGTGTGGGCTTCAAGTGCCCAGAAAGGAAAGGAATTGCAGACTTTTTACAAGAGGTAACTTCTAGAAAGGACCAAGAACAGTACTGGTTTAGAAGGGACATACCTTATCAGTACGTTAGTGTGCCTGATTTTGTAACCCACTTCAACAATTACCGCATTGGTAAACAACTTCATGAAGAGATTCAAGTTCCCTTTGATTCTAGTAAAACTCATCATGCTGCATTAGTGAAGGAAAAGTATGGAATCCCCAAATGGGAACTTTTCAAGGCATGTTTTTCAAGAGAATGGCTATTCATGAAGCGTAGCTATTTTGTTTACATATTTAAGACTTTTCAGATTACTATCATGTCTATAATTACAATGACAGTATTTTTTAGAACAAAAATGGAGCATGGTCAACTTGAGGATGGGGGGAAATATTATGGTGCACTGTTTTTCAGTCTTATTAATGTGATGTTCAACGGAGCAGCAGAACTTGCAATGACTGTTAACAGAATTCCTGTTTTCTTCAAGCAGAGAGATTTCTTATTTTATCCCGCATGGGCTTTTGCACTGCCCATTTGGGTCCTCAGAATTCCTCTCTCTATAGTGGAATCGGTATTATGGATCATCCTCACTTATTATACTATCGGTTTTGCTCCAGCACCTAGTAGGTTTTTCCGTCAACTACTAGCATTCTTCTGTGTGAATCAAATGGCTCTATCCCTTTTCCGGTTCATTGCTGCAATTGGAAGGACAAGAGTTGTGGCTAACACATTTGCTTCCATAACTATTTTAGTTGTTTTCGTCCTAAGTGGATTTACTGTTTCAAGAGATGATATTGGGCCATGGATGATATGGTGCTATTATGCTTCCCCTATGATGTATGGAATGACTGCAATAAGCATCAATGAATTTCTAGACAAAAGATGGAGTACTCCTAATATGGACCCTAGAATTGATGAACCCACAGTTGGGAAGGCATTACTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATATCTATCGGTGCTCTTATTGGATTTTCTCTACTGTTCAATGTCTGTTTCATTCTTGCTCTAACTTACTTGGACCCATTCAGAAGCTCAAAATCTATCTTGGTGGAACAAGAAGACAATAGGGACACCACACCAGCATCCTCCTCACTGAAAAGAACAGGAGAAGTGACAGAAAGTTCAGCTTCAAATGTTGAATCGTTTGAAGGTGTTGACATGGAAGTAAGAAACAACACACGTAGCTCTATTCCTAAAGCTGCAAAGAATGCAAAATTCAGGAAGGGAATGGTGTTACCCTTCCAGCCTCTGTCACTTGTTTTTGAAAATGTGAATTATCATATCGATATGCCAAATGAAATGAAGAAGCAAGGAATTGAAGCGAATAGACTCCAACTACTAAGAGACATAAGTGGTGCTTTTAGGCCTGGAATTTTAACAGCATTAGTTGGTGTAAGTGGTGCAGGAAAAACAACTTTGATGGATGTGCTTGCAGGAAGGAAAACAAGTGGTCACATAGAAGGAAGTATCAGCATATCGGGATATCACAAGAACCAAGCAACTTTTGCTCGGATTAGCGGTTATTGTGAACAAAATGATATCCACTCTCCCAATATTACAGTTTATGAATCGCTTCTGTTTTCTGCTTGGTTGCGGCTCAGTAAAGAGGTCGATATAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTGGTTGAGTTACATCTAGTGAGAAATTTCTTAGTCGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTCACCATTGCTGTAGAATTAGTTGCGAATCCTTCCATTATCTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCGGTTGTTATGCGTACAATTAGAAACACAGTGGATACAGGGAGAACTGTTGTGTGCACAATTCACCAACCAAGCATTGATATATTTGAACATTTTGATGAGCTGCTTTTGTTGAAGACGGGTGGACAAGTGATATATGGTGGTCCTCTAGGTCAAAATTCTGAGAAACTTATCGAGTACTTTGAGGCTATTACAGGAATTCCAAAGATTGAAGATGGATACAATCCAGCTACATGGATGCTGGAGATCACTTCTCCTGTGGTTGAGTCTCAGCTTGCTATAGATTTTGCGGAATTATACAATAAGTCAAGCCTTTACGAAAAGAGCCATGAACTTATCAAGGAACTATCCACACCAGCACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCACAACCATTTCTTACTCAATGCAATGCTTGCTTCTGGAAACAGTACTGCTCCTATTGGAGGAATCCGCAGTACAATGCCATCAGATTCTTCATCACAATAGTTATTGGCATTTTGTTTGGACTTATTTATTGGAAAAAAGGAGATGAGATACAAAAGGAACAAGACCTTTTAAATCTTGTTGGAGCTATGTATTCCTCGGTTATTTTCCTTGGTGCATCCAACACTAGCAGTGTGCAACCTATTATTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCAGCTGGATTGTACTCAGAACTGCCCTATGCAATTGGTCAGATTGCGATTGAAGTAATTTATGTTTCAATCCAAAGTCTGATATACTCCACTATCCTGTACTGGATGATTGGGTTCGAACCACAAGTCGAAAACTTCTTTTGGTTCTACTTCTTCATATTCATGTCCTTTATCTACTTCACACTATATGGAATGATGACAGTGGCCCTGACACCAAGCCACCAAATTGCTGCCATCGTGATGTCTTTCTTCATCAGTTTTTGGAACCTATTCTCTGGTTTTCTTATTCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGCATCTCCCGTGGCATGGACTATATATGGACTGGTGACATCCCAGGTGGGTGATAAGAATAGTCCAATAGAGGTACCTGGAGATAGGCTCATGACAGTAAAAGATTATCTTGAGAGGCGATTGGGCTTTGAACATGACTTCCTTGGATTTGTTGTTTTGGCTCATATTGCTTTTTGCCTTCTCTTCCTTTTTGTATTTGCGTACGGCATCAAGTTTTTAAACTTCCAGAAACGATAA | 4389 | 0.3967 | MEAETGEKDMVRAVSDGRRRKSFAELIEKSASFHERSDEEEAKWKALWRLPTYDRMRKVILKQVLDNGKAEYEEVDINKLGVEEKKHLLESIIKTAEIDNENFLQKMRDRIDRVGIEIPKIEVRFENLSVEGDAYDGTRALPTLINATLNIIEGLLGYIKILAFKKRVVKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKMDKDLRVSGRVTYNGHELSEFVPQRTCAYISQYDLHHGEMTVRETLDFSGRCLGVGTRYDMLIELSRREKASGVKPDPEIDAFMKATSMEGQETSLVTDYILKILGLEMCSDILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVAMIISLLQPAPETYNLFDDIVLLSEGEIVYQGPRESVLDFFQSVGFKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYQYVSVPDFVTHFNNYRIGKQLHEEIQVPFDSSKTHHAALVKEKYGIPKWELFKACFSREWLFMKRSYFVYIFKTFQITIMSIITMTVFFRTKMEHGQLEDGGKYYGALFFSLINVMFNGAAELAMTVNRIPVFFKQRDFLFYPAWAFALPIWVLRIPLSIVESVLWIILTYYTIGFAPAPSRFFRQLLAFFCVNQMALSLFRFIAAIGRTRVVANTFASITILVVFVLSGFTVSRDDIGPWMIWCYYASPMMYGMTAISINEFLDKRWSTPNMDPRIDEPTVGKALLKARGIFTEDYWYWISIGALIGFSLLFNVCFILALTYLDPFRSSKSILVEQEDNRDTTPASSSLKRTGEVTESSASNVESFEGVDMEVRNNTRSSIPKAAKNAKFRKGMVLPFQPLSLVFENVNYHIDMPNEMKKQGIEANRLQLLRDISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGHIEGSISISGYHKNQATFARISGYCEQNDIHSPNITVYESLLFSAWLRLSKEVDIETRKMFIEEVIELVELHLVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTIRNTVDTGRTVVCTIHQPSIDIFEHFDELLLLKTGGQVIYGGPLGQNSEKLIEYFEAITGIPKIEDGYNPATWMLEITSPVVESQLAIDFAELYNKSSLYEKSHELIKELSTPAPGTKDLYFPSKYSQPFLTQCNACFWKQYCSYWRNPQYNAIRFFITIVIGILFGLIYWKKGDEIQKEQDLLNLVGAMYSSVIFLGASNTSSVQPIIAIERTVLYRERAAGLYSELPYAIGQIAIEVIYVSIQSLIYSTILYWMIGFEPQVENFFWFYFFIFMSFIYFTLYGMMTVALTPSHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSPIEVPGDRLMTVKDYLERRLGFEHDFLGFVVLAHIAFCLLFLFVFAYGIKFLNFQKR | 1462 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa3g00418 | 1462 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 156 | 429 | IPR003439 | GO:0005524 | |
Vifa3g00418 | 1462 | MobiDBLite | consensus disorder prediction | 795 | 820 | - | - | |
Vifa3g00418 | 1462 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 24 | 1462 | - | - | |
Vifa3g00418 | 1462 | SMART | AAA_5 | 898 | 1090 | IPR003593 | GO:0016887 | |
Vifa3g00418 | 1462 | SMART | AAA_5 | 181 | 406 | IPR003593 | GO:0016887 | |
Vifa3g00418 | 1462 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 870 | 1113 | IPR003439 | GO:0005524 | |
Vifa3g00418 | 1462 | FunFam | ABC transporter G family member 34 | 159 | 463 | - | - | |
Vifa3g00418 | 1462 | Pfam | ABC transporter | 172 | 352 | IPR003439 | GO:0005524 | |
Vifa3g00418 | 1462 | CDD | ABCG_PDR_domain2 | 858 | 1096 | IPR034003 | - | |
Vifa3g00418 | 1462 | MobiDBLite | consensus disorder prediction | 796 | 820 | - | - | |
Vifa3g00418 | 1462 | Pfam | ABC-2 type transporter | 387 | 441 | IPR043926 | GO:0140359 | |
Vifa3g00418 | 1462 | Pfam | ABC-2 type transporter | 1070 | 1141 | IPR043926 | GO:0140359 | |
Vifa3g00418 | 1462 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 884 | 1097 | IPR027417 | - | |
Vifa3g00418 | 1462 | Pfam | ABC-2 type transporter | 508 | 720 | IPR013525 | GO:0016020|GO:0140359 | |
Vifa3g00418 | 1462 | Pfam | ABC-2 type transporter | 1186 | 1398 | IPR013525 | GO:0016020|GO:0140359 | |
Vifa3g00418 | 1462 | Pfam | Plant PDR ABC transporter associated | 727 | 790 | IPR013581 | - | |
Vifa3g00418 | 1462 | Gene3D | - | 862 | 1111 | IPR027417 | - | |
Vifa3g00418 | 1462 | FunFam | ABC transporter G family member 40 | 875 | 1105 | - | - | |
Vifa3g00418 | 1462 | Gene3D | - | 161 | 456 | IPR027417 | - | |
Vifa3g00418 | 1462 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 71 | 208 | IPR027417 | - | |
Vifa3g00418 | 1462 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 169 | 428 | IPR027417 | - | |
Vifa3g00418 | 1462 | Pfam | ABC-transporter N-terminal | 91 | 147 | IPR029481 | - | |
Vifa3g00418 | 1462 | Pfam | ABC transporter | 889 | 1040 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa3g00418 | Vifa-Chr3 | 58917039 | 58925492 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa3g00418 | 886 | 1073 | Calmodulin-binding Proteins | AT2G36910 | 26.238 | 1.38e-06 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa3g00418 | K08711 | - | gmx:100788067 | 2409.79 |