Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00394 ATGAAGAACTCTGCTTCAGATCAAGTATTTTTCATTGAGAGCGATGAAGAAGGTGAAGAAAGGGAGTTCGGAAGAAATGAAATGGATGGAAATGAATCCGATTATTCCGATGACTCAAATGACAATCAAGTACAGAGAAAACCAAGTTCTTACAGCATGGCGTGGCCTCAAAGTTACAGGCAATCCATTGATCTGTATGGGAGTGTGCCATCACCAAATATAGGATTTCTCGGGACTTCATCGCTCACAGGATTAGGCAGTTCTTTTCTTGGTTCATCCTTGACTAGGAGGCACACGGCTGAATTTTTACCTCCACTGAAAAAGCCTCTGGTACAACCAATAGATGAACAACAGCGAAAGAGCTCTAAGACATTGCTTCCTCCTCACCCGTCTAGGAAGTCTTCCATGCGGAAGGATGCTTCAAAGATTTCTCATGAAGTTCATATTCCTAGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTCTGTGGTGTTGGACTCCTTTCAGTCCCTTATGCTCTTAAACAAGGTGGATGGACTGCACTTACAATTTTGCTCATATTTTCAATATTCTCCTTCTATACCGGCTTGCTGTTGCGCTATTGCTTGGATAGTGAACCTGGACTAGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACCACTGGACGTGTTATCATTTCGATAATATTATACATGGAATTATATGCTTGTTGCATTGAATATATAATTCTAGAAAGCGACAACTTATCTTCCTTATTTCCAAATGCACACTTGAGTTTGGGTGGATTTGAATTGAATGCACACATTCTATTTGCAATATTCACCACATTAGCTATTCTTCCTACTGTTTGGCTCCGGGACCTTCGCATTCTAAGTTACCTATCAGCTTGCGGAGTTATTGCGACAATTGTTGTGGTTCTATGCTTGTTATGGGTTGGCGTGGTAGACGATCTTCCTATGCATACAAAAGGAACAACACCACTTAATATTTCAACATTTCCTGTTGCTATTGGACTCTATGGTTACTGCTTCGCTGGACATGCTGTCTTCCCCAACATATACACAGCTATGGCAAATCGAAATCAATTCCCCGCAGTGCTCTTGATATGTTTTGCTATTTGTACAACAATGTATTTCACAGTAGCTATTATGGGATACTCAATGTTTGGAGAAACTACACTCTCTCAGTACACTCTTAACATGCCCCGGGAATTGGCTGCCTCCAAAATCGCTCTCTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATGA 1296 0.4144 MKNSASDQVFFIESDEEGEEREFGRNEMDGNESDYSDDSNDNQVQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTSSLTGLGSSFLGSSLTRRHTAEFLPPLKKPLVQPIDEQQRKSSKTLLPPHPSRKSSMRKDASKISHEVHIPSQCSFGQAVLNGINALCGVGLLSVPYALKQGGWTALTILLIFSIFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIILESDNLSSLFPNAHLSLGGFELNAHILFAIFTTLAILPTVWLRDLRILSYLSACGVIATIVVVLCLLWVGVVDDLPMHTKGTTPLNISTFPVAIGLYGYCFAGHAVFPNIYTAMANRNQFPAVLLICFAICTTMYFTVAIMGYSMFGETTLSQYTLNMPRELAASKIALWTTVVNPFTKYPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00394 431 MobiDBLite consensus disorder prediction 1 53 - -
Vifa3g00394 431 MobiDBLite consensus disorder prediction 115 129 - -
Vifa3g00394 431 Pfam Transmembrane amino acid transporter protein 153 431 IPR013057 -
Vifa3g00394 431 MobiDBLite consensus disorder prediction 18 32 - -
Vifa3g00394 431 PANTHER OS05G0424000 PROTEIN-RELATED 161 423 - -
Vifa3g00394 431 MobiDBLite consensus disorder prediction 111 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00394 Vifa-Chr3 55989822 55991959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00394 1 431 Amino Acid or Auxin Permease AAAP Family AT2G39130 65.604 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00394 K15015 - gmx:100798108 634.795