Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00393 ATGGATTCGTTTTGTATATCTTTCCGCGTACATAGACGTTGTTTCTTAATTAGCAGCACATATGCTTTGAGTCTAACTCCAGTAGCAATGTCTGTGGAGGAATTGATACCACCAAATAATCCCCACTTTCAGTTCTACTCCATCCTCATCAGAACGGCGCTAGTCGTTTCTACACTGCTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTAATGTCATTAATTGGGTCTATGCTCACAATGTTTGTTTCTCTTATTCTACCGTCTGCTTGTTTCCTAAGCATCAAGCGTGGCAGAGTCACGCGTTCTCAGGTAGCACTTTGTGTTGCAGTGATTGTAGCAGGCCTTGTATCATCTGCGCTTGGATCATACTCAGCAATGTCGGAGATTATTAAAGAATTGTTAGCGTGA 411 0.4234 MDSFCISFRVHRRCFLISSTYALSLTPVAMSVEELIPPNNPHFQFYSILIRTALVVSTLLVGLSVPFFGLVMSLIGSMLTMFVSLILPSACFLSIKRGRVTRSQVALCVAVIVAGLVSSALGSYSAMSEIIKELLA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00393 136 Pfam Transmembrane amino acid transporter protein 19 126 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00393 Vifa-Chr3 55989050 55989737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00393 19 134 Amino Acid or Auxin Permease AAAP Family AT5G02180 50.000 7.03e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00393 K15015 - gmx:100781123 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00393 3 55989050 55989737 Vifa3g00393 3 55989050 55989737 ECH