Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00374 ATGGTATTTTCAGGTAAGCATGCGTGGGGAGAGACGAAAGGCTTGACCCTACAAGTCCTAACAGGAAGGTGGTTTATGGTGTTTTCATCATTTATGATCATGTCTGTATCTGGAGCAAGCTACATGTTTGGGCTATACTCAAGAGAAATAAAATCAGTTTTGGGATATGACCAATCTACTCTAACTCTTTTAAGCTTCTTCAAGGACTTAGGTTCTAACATAGGCATTCTTTCAGGCCTTGTGAATGAAGTTACACCCCCTTGGGTTATCCTATCCATTGGTGGTGTTCTAAACTTTTTCGGGTATTTCATGATATGGCTTGCAGTCACAAGAAAAATCTCCAAGCCTGCAATATGGAATATGTGCTTATACATATTCATTGGAGCCAACTCTCATTGTTCAACCAACACTGGTGCTTTAGTCACAAGTGTAAAGAACTTCCCTGGTAGCAGAGGCGTTGTGATAGGCCTTTTGAGCGGCTATCTTGGTTTGAGTGGAGCTATCATCACTCAGCTATACTATGCCTTCTATGGAGACGACTCTAAGTCTTTGATTTTGCTTATGGCTTGGCTACCAACTGCTGTGACTTTTGCTTTTATGCCGGTTATTAAACACCACAAGAGAGGTGAACAACCGAATGATTCCAAAGCTTTCTATAATTTCCTTTACATGAGTTTAATCCTTGCAGGATTCCTCATGGTAATGATCATAGTACAAAAGTGTTTCATCTTTACTAAGAGTGAGTACTATGTGACTACCACTGTCATGGTTCTCTTGCTTATCCTGCCTCTTGTTGTTGTTATTATGGAAGAAGAAAGGATCTGGAGGAACAAAAAAGAGAACATGAGTCCTCCTAAGGGTTTGGATATCATCACACAGACTCACCAAGCTAGTGGAGAAGAGGGTACTCAGAATCAAAACATACGTAGAGGCGAAGATCATACAATAGTTGAAGCCATTTTTAGCCTTGACATGATGACACTCTTTGTAGCCACAATTTGTGGACTTGGTGGAACCCTTACTGTGGTAAATAACTTGAGTCAGATTGGGTTATCTTTAGGATATCCTGCACATAGTATAACCACATTTGTTTCACTAATGGCAATTTGGATCTATCTAGCTTCCATTATTATTGGTTTCTGCTTTGGAGCAAACTGGCCAGTACTATTTTCAATCATATCAGAACTATTTGGTCTTAGATATTACTCAACATTGTACAATGTTGGGTCAGTAGCAAGTCCAATTGGGTCATACTTGTTAAGTGTGAGGGTTGCTGGTTATCTCTATGACAAGGAAGCCACAAAGCAAATGGCAGCATTAGGATTAAAGAGGAAGCAAGGGGAGGAGTTGAATTGCAATGGAAGTGAGTGCTACAAATTGGCTTTCATTATAATCACTGCTGCTAGCCTCTTTGGAGCACTTGTCTCTCTAACTTTAGTTTTAAGGACTAGAGAGTTTTACCAAGGTGACATATACAAGAAGTTCAGAGAGGAAGCTAGAAGTAATGAAAATGAATTGGTTGTGACTCAGAACAAGGTTGGACCTGCCTCAAATGTTGGATAA 1563 0.3992 MVFSGKHAWGETKGLTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQSTLTLLSFFKDLGSNIGILSGLVNEVTPPWVILSIGGVLNFFGYFMIWLAVTRKISKPAIWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGVVIGLLSGYLGLSGAIITQLYYAFYGDDSKSLILLMAWLPTAVTFAFMPVIKHHKRGEQPNDSKAFYNFLYMSLILAGFLMVMIIVQKCFIFTKSEYYVTTTVMVLLLILPLVVVIMEEERIWRNKKENMSPPKGLDIITQTHQASGEEGTQNQNIRRGEDHTIVEAIFSLDMMTLFVATICGLGGTLTVVNNLSQIGLSLGYPAHSITTFVSLMAIWIYLASIIIGFCFGANWPVLFSIISELFGLRYYSTLYNVGSVASPIGSYLLSVRVAGYLYDKEATKQMAALGLKRKQGEELNCNGSECYKLAFIIITAASLFGALVSLTLVLRTREFYQGDIYKKFREEARSNENELVVTQNKVGPASNVG 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00374 520 Coils Coil 492 512 - -
Vifa3g00374 520 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 371 - -
Vifa3g00374 520 Gene3D MFS general substrate transporter like domains 321 487 IPR036259 -
Vifa3g00374 520 Pfam Nodulin-like 23 268 IPR010658 -
Vifa3g00374 520 SUPERFAMILY MFS general substrate transporter 24 487 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00374 Vifa-Chr3 49331816 49333522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00374 10 498 Nodulin-like Gene Family AT2G39210 54.741 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00374 - - gmx:100789645 709.138