LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa3g00310	ATGAGGTTCCTTTGGTTGTCTTCCTGTAAATTGAAAGATCAAGCTTGCCAAGATGTTGCACGAGCATTGCCTCACATGGTTTTGGAAGTTATCAACAATGACGAAGATGTAGTCGAGGATATTGGAATATTGTACATGTCTTTTGATAGTTCTACCACTCAGAATGTCAAACATGACGATTCAATTGGTAATAACACCCTTGCTTCAAATTCAAGCATTAGTTGTTCTCTTAATAGACTTACTAAGGAGAACACCTATACTGGGAACGTTGAAGGAGAGACTGTTGACAAACTTTCTAAAAGTTGCAATAGTTCAGGTTCTCAGTGTTCATTGCCAAATGAAAGGAAATTATTGTCTTCTGAATTAAATACTTGCGACATAGAATGTGAAGCTACAACACCGCCAATACCTGCATTGGAGAATGATAGTTTCTACAACAATGACAATACATGTTCTTTGAACATAACAAGTGCTTCCAAAGTTGATACTTTGTCTCTCTATGAATCCTTGGGTTATGGACCTGATGATTTGGAAGAATGTGTTGCTGTTCTACATGACTTGTATTTGTCAAGAAGGGTTGCATCCTTGAAAGTTGTTCGAGACAAGTACAAGCAGAACAAGTTCAACAGTTCACAACTTACACCAACGCATGATGCATATACAAATTCATATGACCAGAGTGCAAACACTGATGCTAGAAAGACAAGTGGCAATAACTCCGCAACATTAGGCATGCCGGACATAGAAATCAAATCTTCAGGGGATGGAAGTCAAAAAATGGATTTTAGAGATACATATTTTGAAAACAAGACTTCCTTTCCTACTGGGAGACAAAATTGGAACATGGAATTCAAGGATGCTGCAGAATCTGTTGATCATGCAACCATGGCTGGAAAGCAGCTGTAG	906	0.383	MRFLWLSSCKLKDQACQDVARALPHMVLEVINNDEDVVEDIGILYMSFDSSTTQNVKHDDSIGNNTLASNSSISCSLNRLTKENTYTGNVEGETVDKLSKSCNSSGSQCSLPNERKLLSSELNTCDIECEATTPPIPALENDSFYNNDNTCSLNITSASKVDTLSLYESLGYGPDDLEECVAVLHDLYLSRRVASLKVVRDKYKQNKFNSSQLTPTHDAYTNSYDQSANTDARKTSGNNSATLGMPDIEIKSSGDGSQKMDFRDTYFENKTSFPTGRQNWNMEFKDAAESVDHATMAGKQL	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa3g00310	301	SUPERFAMILY	Cyclin-like	163	210	IPR036915	-
	Vifa3g00310	301	Pfam	Cyclin, C-terminal domain	164	214	IPR004367	-
	Vifa3g00310	301	Gene3D	-	150	219	-	-
	Vifa3g00310	301	MobiDBLite	consensus disorder prediction	209	246	-	-
	Vifa3g00310	301	MobiDBLite	consensus disorder prediction	209	257	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa3g00310	Vifa-Chr3	35753302	35755134	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa3g00310	166	216	Core Cell Cycle Gene Families	AT5G43080	49.020	7.82e-10	57.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa3g00310	-		K06627	tpra:123920018	133.65