Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00264 ATGGCAACAACAGAACCACTCGTTGAAGGCTCCACGGCAGAGGAAGTGGCGGCGGAACTGGTTCCGGCACCGGAGGTAGGGTTAAAGCACAAACTAGAAAGAAGATGGACTTTCTGGTTCGATAACCTATCTAAAACTAAACAAGGCGCGGCCTGGGGAACCACTCTCCGCAAAGTTTATACCTTCGACACCGTCGAAGAGTTCTGGTGTTTGCATGATCAGATTTTCAAGCCCAGCAAGTTGCCTGGCAATGGTGATTTTCACTTGTTTAAGGATGGGATTGAACCGAAGTGGGAAGATCCGGAGTGTGCCAATGGAGGGAAGTGGACTCTTTCCACCAAAGGGAAGGGAAATCTCGATACCATGTGGCTCGAAACTTTGATGGCTTTGATTGGGGAGCAGTTTGGAGATTCTGAGGATATTTGTGGTGCAGTTGTGAGTGTACGCCAGTGGCAGGATAAACTTTCATTGTGGACAAAAACGGCGGCAAATGAGTCTGTCCAGATGAGCATCGTAAGGAAGTGGAAGGAAATCATTGATGTTAGCGACAAGATGACATATAACTTTCATGAAGAGGCTAAAATTCGAGGTGCAAAGGCTCGATACACTGTGTAA 615 0.4732 MATTEPLVEGSTAEEVAAELVPAPEVGLKHKLERRWTFWFDNLSKTKQGAAWGTTLRKVYTFDTVEEFWCLHDQIFKPSKLPGNGDFHLFKDGIEPKWEDPECANGGKWTLSTKGKGNLDTMWLETLMALIGEQFGDSEDICGAVVSVRQWQDKLSLWTKTAANESVQMSIVRKWKEIIDVSDKMTYNFHEEAKIRGAKARYTV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00264 204 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 19 192 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vifa3g00264 204 Pfam Eukaryotic initiation factor 4E 32 188 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vifa3g00264 204 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 204 IPR023398 -
Vifa3g00264 204 ProSitePatterns Eukaryotic initiation factor 4E signature. 86 109 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vifa3g00264 204 FunFam Eukaryotic translation initiation factor 4E 22 204 - -
Vifa3g00264 204 SUPERFAMILY eIF4e-like 13 196 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00264 Vifa-Chr3 29202370 29204641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00264 17 204 Eukaryotic Initiation Factors Gene Family AT5G35620 59.585 1.95e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00264 K03259 - gmx:100499799 316.235