Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00219 ATGGGAATAAGAGATTTTCGTATCAAAATCAAGGCTTTAAAAGTGAAACTCTCGTGTTTAGGAAAAAGAAGCACGAGAAGAAAGCATGAAGTTGCGGGCAAATCTTCATGGATGATGCCGATATCGCATGGTCATCATGTGGTGGAGCATGATTTGTTTGAAGGTGATGATTCTGATGATTATGAATTTGATTCAGTTGTAATACAAAGAGAGCCAATTGGTGATAAAGAAGTGTGGTATTTTGGAATTTTTGATCCTTTGATTGGAGATTGTGTTACCAAGTATTTACAATCTAATTATTTTGGCAAGAAGCTCAATGAGACTCATATGGCAAGAAAAGCCAAAGAAACGCTCAAGAAAGCATACATAGGTGCCAAAACAAAGATCAGAGAAACACACAAGTCAGATGAAACTTGCTTAATAGGTTCAACATCAGTGATAATAATAAATGGAGAAAAACTTGTACTAGCCAACATAGGAGACTACAGAACTGTTTTGTGTAAAGATGGTGTAGCTTATCAGACACATGGAAGATACAATCAACCAGCCAAGAAACATTGGTATCACAGACTCTTTTCAGGTGGTGATGCAACAACAGCTACAAAGTATTCTAAAGCTTCAGAACTAGTGGTCGGAGGTTACTACCGGATCGACTCATATACTGAATTTGTGATTTTAGCAAGCAATGGAATATGGGAGGTGATGAAGAACCAAGAGGCGGTGAATCTTATCAGACACATAGAGGATCCACAAGAAGCAGCTGAATGCCTAGCTAAGGAAGCATTGGTTAGGAGGAGCAAAGGCAACATTTCATGTTTAATCATTCGATTTGATTGA 837 0.3799 MGIRDFRIKIKALKVKLSCLGKRSTRRKHEVAGKSSWMMPISHGHHVVEHDLFEGDDSDDYEFDSVVIQREPIGDKEVWYFGIFDPLIGDCVTKYLQSNYFGKKLNETHMARKAKETLKKAYIGAKTKIRETHKSDETCLIGSTSVIIINGEKLVLANIGDYRTVLCKDGVAYQTHGRYNQPAKKHWYHRLFSGGDATTATKYSKASELVVGGYYRIDSYTEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRRSKGNISCLIIRFD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00219 278 PANTHER PROTEIN PHOSPHATASE 43 276 IPR015655 GO:0004722|GO:0006470
Vifa3g00219 278 CDD PP2Cc 64 277 IPR001932 -
Vifa3g00219 278 ProSiteProfiles PPM-type phosphatase domain profile. 60 277 IPR001932 -
Vifa3g00219 278 SUPERFAMILY PP2C-like 67 278 IPR036457 -
Vifa3g00219 278 SMART PP2C_4 39 275 IPR001932 -
Vifa3g00219 278 Pfam Protein phosphatase 2C 74 174 IPR001932 -
Vifa3g00219 278 Pfam Protein phosphatase 2C 217 270 IPR001932 -
Vifa3g00219 278 Gene3D - 57 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00219 Vifa-Chr3 19789917 19792167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00219 1 277 PP2C-type Phosphatase Gene Family AT3G23360 42.143 4.73e-66 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00219 K19704 - gmx:100794054 381.719