Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00217 ATGGTCACTAGGAGTGATCTCTTGAACTCGGTTGCATGTAGATTATGCAACCGAGTATTTATCAGCACTCAAGCACTCGTAACTCACATCGAGTCTCACATGGAGAATCAAGAAGCATCAATTAGAAGACTCTATTCGAAAAAAGATATCATTCCTCAAAGGCAATTTTCTTCTCATTGTTTTCCACTTGGTTTTCATGTTCCATTAATGGAAACTCAAAACATCAATGATGGTAAAACTTTGCAACCACAATCTATGATGTTTCCCCAGCCAAGAAAAAACCAATTCTTCAATGTTGGTTCTATGCAAATGCAATTTCCACCACATGTTTACCAATTGAAGCATCTAGGAGAAGAATCTTCAAATGATGGTACTAAAGCATATATCATGCAACTTGAGAAACCTATTAAGAAGATTGATTTCATTGATTTGGTTAATAATGATGAAGATGATGATAACTCAGATGTCTATGCATTGGATTTAGCACTTAAGCTTTAG 498 0.3534 MVTRSDLLNSVACRLCNRVFISTQALVTHIESHMENQEASIRRLYSKKDIIPQRQFSSHCFPLGFHVPLMETQNINDGKTLQPQSMMFPQPRKNQFFNVGSMQMQFPPHVYQLKHLGEESSNDGTKAYIMQLEKPIKKIDFIDLVNNDEDDDNSDVYALDLALKL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00217 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 38 IPR013087 -
Vifa3g00217 165 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifa3g00217 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00217 - K23196 lja:Lj2g3v1643270.1 129.413