Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00199 ATGCAGTATGAGGAAGAACAACAACACTATGCTTCTCTCTCCAACTTACTTCCACACTTCACCACCATTCCCACCATCCACAAAGCATGGCTTTTCAACAACTCACTCGGAATCTTTTCTTTCACCCAACCAGATCTCTTAACAAACCAAACCAAAACTTCAATTCTCTCCTGTGAACTTGTTAAACAAGAAACCGATATTTGGAGTTCGTCTCGCTTGGAGAAGGAGTTTCATATTCCTCAATCCATGCATGGTTCCGTATATAATGATGGATGGTTTGAAGGTGTTTCTTGGAACTTGGATGAAACATTGATAGCATATGTAGCAGAAGAGCCCTCTTCTACAAAGCCGGTATTTAATAATATGGGTTATGTGAAAGGTGGTTGTGCAGAGAAGGATATTGGTAGCTGGAAAGGCCAAGGAGACTGGCAGGAGGATTGGGGAGAAACATATTCTGCAAAGAGACGGCCTACACTTTTTGTTATCAACATCAATAGTGGAGAGGTACAATCTGTCAAAGGAATTGACAAGTCTTTGAGTGTCGGCCAAGTTGTGTGGGCTCCGTTTAAAGATGGTTTGGAACAATATCTTGTTTTTGTTGGGTGGTCATCTGGGACAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTTCATTGTATGCGGTTAGAGCACCACATCATGAGTCAAAATCCGAGGAACCAGAGCACCACTCAACTCAAGAATTGCATGCACTGAATCTAACTCCAACGATAAGTAGTGCTCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTTCTTGTATTTTTATCTGCAAAAAGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGGATTGATTGGCCAACTGATGTGAAACTGTGCCAATCCTCTAAAGTTTACGACATCATTCCTGTTGTAATGTGTGCTGAGGATGGTTGTCTCCCCGGGCTTTATTGTACAACTATCCATAATAATCCTTGGCTTTCTGACAACTGCACAATGATCATATCATCCATATGGCACAGCTGTGAAGTTCTACTTTCTGTGAATGTTTTGAGCGGGGAAGTATTACGTATCAGCCCGGCAGACTCAAGTTTCTCGTGGAATCTTCTTACAGTGAATGGGAACAATATTCTTGCCATTTCCAGCAATCCGATCAATGTTCCTCAGATTATGTACGGAATGGTCATTGAGAAGGCCAAGAGAAATATTACATGGAACTGGTCAAAGATATCCAGTCCCATATTAAAATGCTCTGACAAGGTCAGATCTTTGTTGTCCTCTCTTCAGTGCAGTATACTGAAGATCTCAGTCACAGATGCTTCAAATGATCCAATAAAAGGTGCTGCTAAACCTTTTGAAGCTATATTTGTGTCATCCAAAACCATGAACAAGGATTTATGTGATCCATTAATTGTGATCCTTCATGGAGGGCCACAAGACGTCTCTTTGTCACACTTCTCCAAGTCTTGGGCGTTTCTATCTTCGGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTAGGATTTGGCGAGGAAGCACTACAATCTCTTCCAGGGAAAGTTGGACATCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTGATCAACTTGGGTCTTGCCAGTCCATCCAAGATTACGGTGATGGGAATTTCACATGGTGGTTTTTTGACGACACATTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCTGCTGCAATTAATCCTGTTTGTGACTTTGCACTGATGGTTGGTACAACCGATATCCCTGATTGGTGCTATGTAGAGGCTCTTGGAACCATTGCAAGAAATCGGTTTATGGAAACAATTTCAGCAGAAGATTTGTCTCTCTTCTATAGCAAATCTCCTATCTCGCACGTTTCAAAGGTAAAGGCACCAACACTTTTCCTTTTAGGTGCACAAGATCGTCGCGTACCAATCTTTGATGGACTGCAATATGCTCGAACTTTAAAGGCGAAAGGAGCAGAGGTCAAAATCATCATGTTTCAAAATGATGTTCATGCACTCAAAAGGCCACAATCTGAATGGGAAAGTATCCTTAACATTGGGGCGTGGTTCAACAAATACTGCAAATAA 2130 0.4183 MQYEEEQQHYASLSNLLPHFTTIPTIHKAWLFNNSLGIFSFTQPDLLTNQTKTSILSCELVKQETDIWSSSRLEKEFHIPQSMHGSVYNDGWFEGVSWNLDETLIAYVAEEPSSTKPVFNNMGYVKGGCAEKDIGSWKGQGDWQEDWGETYSAKRRPTLFVININSGEVQSVKGIDKSLSVGQVVWAPFKDGLEQYLVFVGWSSGTRKLGMKYCSNRPCSLYAVRAPHHESKSEEPEHHSTQELHALNLTPTISSALFPRFSPNGEFLVFLSAKSAVDSGVHNATNSLHRIDWPTDVKLCQSSKVYDIIPVVMCAEDGCLPGLYCTTIHNNPWLSDNCTMIISSIWHSCEVLLSVNVLSGEVLRISPADSSFSWNLLTVNGNNILAISSNPINVPQIMYGMVIEKAKRNITWNWSKISSPILKCSDKVRSLLSSLQCSILKISVTDASNDPIKGAAKPFEAIFVSSKTMNKDLCDPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGHQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTHLIGQAPEKFVAAAAINPVCDFALMVGTTDIPDWCYVEALGTIARNRFMETISAEDLSLFYSKSPISHVSKVKAPTLFLLGAQDRRVPIFDGLQYARTLKAKGAEVKIIMFQNDVHALKRPQSEWESILNIGAWFNKYCK 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00199 709 ProSitePatterns Prolyl endopeptidase family serine active site. 537 567 IPR002471 GO:0004252|GO:0006508
Vifa3g00199 709 FunFam Acylamino-acid-releasing enzyme 448 708 - -
Vifa3g00199 709 Pfam Prolyl oligopeptidase family 492 708 IPR001375 GO:0006508|GO:0008236
Vifa3g00199 709 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 7 65 IPR045550 -
Vifa3g00199 709 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 65 231 IPR045550 -
Vifa3g00199 709 SUPERFAMILY DPP6 N-terminal domain-like 74 395 - -
Vifa3g00199 709 Gene3D alpha/beta hydrolase 460 707 IPR029058 -
Vifa3g00199 709 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 63 708 - -
Vifa3g00199 709 SUPERFAMILY alpha/beta-Hydrolases 476 708 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00199 476 692 Carbohydrate Esterase AT5G36210 24.885 1.40e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00199 K01303 - gmx:100812681 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00199 3 15326347 15331096 Vifa3g00199 3 15326347 15331096 ECH