Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00194 ATGACATCAATAGTGAGGAAGTCAAGTATATCACCAAGAAACTGTTGGATTAAGTTGGATATTAATGGACATAGTGCCTTACTTGATGTAGACAAATATGAACTTATGCGTCAAGTTCGAGTGGATGCACGTGATCTTAGAATTCTTGATCCTATTCTTGCTTACCCTTCTGCCATTTTAGGAAGAGAAGAGGTTATTGTTCTTAACTTGGAGCACATCAAGGCAATCATCACAGCTAAAGAGGTGTTTTTGCTAGACCCAACAGATGAAGATGTTGTCCCTGTTGTTAGGGAACTACAAAGGAGATTGTTTATCATTGACACAAATCAGGAAGATGGTCAAAACAATAGTTCACTTGAAGTTGAAGTAGATGAGGATGATGATTCACCTTTCGAATTCCGAGCACTGGAGATATTTCTTGAAGCAATATGTAGCTTCCTGGATGCACGAGTTGCTGATTTGGAGATGGATACTTATCCTACATTAGATGAACTTACTACTATGATCAGTGGTCGAAATTTGGACAAAATTCGTAAGTTGAAGAATAAAATAACAAGGCTGACTGCTAGAGTTCAAAAGGTAAGAGAAGAGATTGAACACTTAATGGATGATGAGGAAGACATGGCTGACTTATACTTATCAAGAAAGTTAGTATCTGCATTATCACCTAAAAGTCACTCAGGTGCTTCATCTCCCAACACAAAATCAAAAAGTGTAGCAACATATCTTAGAGATGAAAATGATGTGGATGAGATTGAAATGCTACTAGAGGCTTATTACATGCAAATTGATGGAACTTTGGACAGATTGTATACGCTACGAGGGTATATTGATGATACTGAAGATTACATGAATATTCAGATTGACAATCATAGAAATCAGTTGATTCAGTTAGAGCTATTTCTTAACTCAGGAGAACTTTCCCCTTGCATTTTATTCAGTAGTGACTGGAATACTTGGCATGAATATTAA 972 0.3663 MTSIVRKSSISPRNCWIKLDINGHSALLDVDKYELMRQVRVDARDLRILDPILAYPSAILGREEVIVLNLEHIKAIITAKEVFLLDPTDEDVVPVVRELQRRLFIIDTNQEDGQNNSSLEVEVDEDDDSPFEFRALEIFLEAICSFLDARVADLEMDTYPTLDELTTMISGRNLDKIRKLKNKITRLTARVQKVREEIEHLMDDEEDMADLYLSRKLVSALSPKSHSGASSPNTKSKSVATYLRDENDVDEIEMLLEAYYMQIDGTLDRLYTLRGYIDDTEDYMNIQIDNHRNQLIQLELFLNSGELSPCILFSSDWNTWHEY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00194 323 FunFam Magnesium transporter MRS2-5 105 295 - -
Vifa3g00194 323 Coils Coil 177 204 - -
Vifa3g00194 323 Gene3D - 4 87 - -
Vifa3g00194 323 FunFam Magnesium transporter MRS2-1 4 87 - -
Vifa3g00194 323 CDD Mrs2_Mfm1p-like 16 308 IPR039204 -
Vifa3g00194 323 Gene3D Magnesium transport protein CorA, transmembrane region 94 295 - -
Vifa3g00194 323 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 308 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00194 Vifa-Chr3 14991726 15012866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00194 2 323 MRS2 Gene Family AT5G64560 56.818 6.22e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00194 K16075 - egr:104449218 378.637