Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00138 ATGCAAAATCTCCTCCAATGGGTGTTGAGAGAGGTGTTGAGTGTGTGTTGGAAGAGAGAGGTGTTGAGAAAACTCAACACAATTGAAGCTGACCAAGGGCATGACGTGGCAGCGCCTCATTGGTCTGGGCCAGGCGCGTGTAGCCCACTCGCTGGGGTTAACCAAAATCCCAACAATTTTCCAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGACATCCTCTGTTCCAAACTTTCAAACATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATTGTTTCTAATGAAGTCGGTCCGAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTTCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAAATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGAATATGCCTCGGAGGTGGTGGACAAAGAATGGGCTGAATACAAAGAATTCAAGACGAAAGAGCTTGAACGATTGGACAACATAGCGTTGATGCAACAGCAGGCTAACAATATAGCCTTGGAGAAGACTAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAGGCAGAACTGTTTGATAATTAA 1260 0.4222 MQNLLQWVLREVLSVCWKREVLRKLNTIEADQGHDVAAPHWSGPGACSPLAGVNQNPNNFPNPNNYQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQTSSVPNFQTYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAKRMQGSGWSENDVLAKAQELYACGKNVKFTLMEEWHALRDQPRYGSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKEYASEVVDKEWAEYKEFKTKELERLDNIALMQQQANNIALEKTKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAELFDN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00138 419 MobiDBLite consensus disorder prediction 155 177 - -
Vifa3g00138 419 MobiDBLite consensus disorder prediction 158 177 - -
Vifa3g00138 419 PANTHER - 148 416 - -
Vifa3g00138 419 MobiDBLite consensus disorder prediction 293 340 - -
Vifa3g00138 419 MobiDBLite consensus disorder prediction 294 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00138 Vifa-Chr3 10910860 10912387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00138 121 399 Glutathione S-transferase Gene Family AT5G41240 26.797 4.23e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00138 - - tpra:123885584 459.144