Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00117 ATGCTTGATAATGTGGACAATATTCATCATTTCATCGACTCAACTTGGAGACTATGTGCTCATCTAGGTTCTTGGGTTTCTGGGTTAATTTCAAAGCCTAACAAAAAGGTGGTTGGCTCAATTTCTAGGTTGGCCGAGGAAAGAGAAAATTGTTATCTAGATTCCATGGATACGGCGTATATAGATATTAGTTCGTCGGATGATGATTTGGAGATATTAGATGATCATCATGGTAGAATTCTCCCAGGATGGGCTGCTTCTGAAAGGAATTCAGATTCAAGAAGGGCAAATGGTTCAAACGCAAGCTCTTCTAACAATTTTCGTTCACTAGTTAGGCCCCATAATCGACTTGGTCCTAGCAATGGAAACACAAGTCAGCATCAGACAGTAAATTCCCGAATTTCTAATTCTCATGGAACCGATTATGAGAAAATGTCATCTCAACAAGCTCTCAAGAGGACCCTTCCATTATCTTATCAACCCATCTCAACAAGCTCTCAAGAGGACCCTTCCATTATCTTATCAACCTGGTCCTAG 537 0.4041 MLDNVDNIHHFIDSTWRLCAHLGSWVSGLISKPNKKVVGSISRLAEERENCYLDSMDTAYIDISSSDDDLEILDDHHGRILPGWAASERNSDSRRANGSNASSSNNFRSLVRPHNRLGPSNGNTSQHQTVNSRISNSHGTDYEKMSSQQALKRTLPLSYQPISTSSQEDPSIILSTWS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00117 178 MobiDBLite consensus disorder prediction 89 149 - -
Vifa3g00117 178 MobiDBLite consensus disorder prediction 90 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00117 Vifa-Chr3 10184535 10185236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00117 79 159 RAD5 or RAD16-like Gene Family AT3G20010 40.741 1.79e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00117 - - lang:109335781 126.716