Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00111 ATGTTGAGTTCATCAACAACAACAATCAATTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCAGGGTTGGAAAGAAGGGACTGGCCTTGGGATCTCTGAGCAGGGTAGATTAGAACCTGTGGAAACTCATGTGAAGAATAATAAGCGGGGTTTGGGAGCAGATAAAGCGAAGAAAAAGATAGTGAAACCTGATCATGGTGCTGATTCCTCTAAAGGAGACAATAAGCAGGAAGATTTGTCTAAAAAGAAAACCAAAGCACTTTCTAAACGGATGAGAAAGATGCAGGAGTTAGAAAAGAAGATGCATGAGAAGGAGTTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCCGACAATGTATGA 363 0.4132 MLSSSTTTINSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADKAKKKIVKPDHGADSSKGDNKQEDLSKKKTKALSKRMRKMQELEKKMHEKEFERAFFREFWPDNV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00111 120 MobiDBLite consensus disorder prediction 29 96 - -
Vifa3g00111 120 MobiDBLite consensus disorder prediction 39 96 - -
Vifa3g00111 120 ProSiteProfiles G-patch domain profile. 11 57 IPR000467 GO:0003676
Vifa3g00111 120 Coils Coil 88 108 - -
Vifa3g00111 120 PANTHER BAT4 PROTEIN-RELATED 3 120 IPR039146 -
Vifa3g00111 120 Pfam G-patch domain 12 54 IPR000467 GO:0003676
Vifa3g00111 120 SMART G-patch_5 9 55 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00111 Vifa-Chr3 9820312 9824571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00111 3 53 C2H2 Transcription Factor Family AT5G26610 49.020 3.15e-10 54.3