Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00110 ATGGAAGAAATGTTGAGTTCATCAACAACAACAATCAATTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCAGGGTTGGAAAGAAGGGACTGGCCTTGGGATCTCTGAGCAGGGTAGATTAGAACCTGTGGAAACTCATGTGAAGAATAATAAGCGGGGTTTGGGAGCAGATAAAGTGAAGAAAAAGATAGTGAAACCTGATCATGGTGCTGATTCCTCTAAAGGAGACAATAAGCAGGAAGATTTGTCTAAAAAGAAAACCAAAGCACTTTCTAAACGGATGAGAAAGATGCAGGAGTTAGAAAAGAAGATGCAGGAGAAGGAGTTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGACAATGTATGA 372 0.4086 MEEMLSSSTTTINSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADKVKKKIVKPDHGADSSKGDNKQEDLSKKKTKALSKRMRKMQELEKKMQEKEFERAFFREFWPDNV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00110 123 Coils Coil 88 111 - -
Vifa3g00110 123 PANTHER BAT4 PROTEIN-RELATED 3 123 IPR039146 -
Vifa3g00110 123 SMART G-patch_5 12 58 IPR000467 GO:0003676
Vifa3g00110 123 MobiDBLite consensus disorder prediction 43 100 - -
Vifa3g00110 123 ProSiteProfiles G-patch domain profile. 14 60 IPR000467 GO:0003676
Vifa3g00110 123 Pfam G-patch domain 15 57 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00110 Vifa-Chr3 9762807 9767432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00110 6 119 C2H2 Transcription Factor Family AT5G26610 33.621 1.67e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00110 - - cam:101497292 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00110 3 9762807 9767432 Vifa3g00110 3 9762807 9767432 ECH