Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00091 ATGTCTCGAGCTGAAGAACTCTGGGAGCGGTTAGTTCGTGCTGCTTTAAGAAGGGAAAGAACTGGTGATGATGCATTTGGGCAACCTGCTGGTGGAATTGCTGGAAATGTGCCATCTGCACTTGCTAAAAATAGAGATATTGATGAAATTTTAAGAGTTGCAGATGAAATTCAAGACGATGCCCCCACAGTTTCTCGAATATTATGTGAGCATGCATATTCATTATCTCAAAATTTGGACCCCAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACCGGTTTGATGTCTGTCATTAAGCAAAAGTTGGCTAAAAGGGAAGTTGGAACCATAGATAGAAGTCAGGACATTGCCCGATTACAGGAGTTCTACAAGAGTTACAGAAAGAAAAATAATGTGGATAAATTACTTGAGGAGGAAATGCAATTGAGGGAATCTGGTGCTTTCAGCCGTAATCTTGGCGAGTTGGAGCGTAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTACTTGAGCAGCTGAGTGAAGAAATTCCTGATGAGCTTAAGCGGGTCATGGAATCAGATTCTGCATCAACCGAGGATCTGATTGCTTACAACATCATCCCTATAGATGCTGCTTCTTCAACAAATGCTATTGCTTTTTTCCCCGAGGTGCAAGCAGCAATTTCGGCTCTGAAGTATTTCAATGGCTTGCCTGAACTGCCCAGGGCCTATTTCATCCCTCCTACAAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGCGCGAACACATAGTTCATCTGCTTGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCAAATTGGATGAAGCAGCCTTGCATGAAGTATTCCTCAAATCCCTCGATAATTACACGAATTGGTGCAACTACCTATGCATTCAGCCTGTCTGGAGCAGTTTGGAAGCTGTTAGTAAAGAGAAGAAATTGCTGTATGTTTCTTTATACCTCCTAATTTGGGGAGAAGCTTCAAATGTCAGGTTTCTACCTGAATGCTTGTGCTACATATTCCATCATATGGCTCGAGAGATGGATGAGATCTTAAGGCAGCAGGTTGCACATACAGCTAATAGTTGCACTTCCGAGAATGGTGTCTCATTTCTTGATCAAGTTATCCTTCCTCTCTATGAAGTTATTTCTGCAGAAGCTGGAAACAATGATAATGGGAAGGCATCTCATTCATCTTGGAGAAATTACGATGATTTTAATGAGTATTTCTGGTCATTACATTGCTTTGAGCTTAGCTGGCCGTGGCGCAAAAGTTCTTCATTTTTCCAAAAGCCAGAACATAGATCTAAGAAAATTTCATCTGGCAGAAGTCAGCGTCAGGGGAAAACATCTTTTGTGGAGCATCGGACTTTTTTTCATCTTTATCATAGTTTCCACCGATTATGGATATTTCTTTTCATGATGTTCCAGGGTCTAGCAATTATTGCTTTCAATGATGGAAGATTTGATGCCAAGACCTGGCGAGAGGTTCTTAGTCTTGGACCCACATTTGTTGTGATGAAATTTTTTGAGAGTGTCCTGGACATTTTCATGATGTACGGTGCATATAAAACGACGAGGCGTTCAGCTTTATCACGAATATTTCTAAGATTTATTTGGTTTAGCGTTACTTCAGTTTTTGTAACTTTCCTTTATATAAAAGCACTCCAGGAAGAGAGTAAAAGAGATTCGAATTCAGTTATTTTCAAATTATATGTGCTTGTCATTGGGATTTATGCCGGTGTTCAGTTTTTCATTAGTTTCCTCATGCGGATTCCTGCATGTCATCTTCTGACAAACCGGTGTGACAGCTGGCCTCTCATTCGCTTTGCGAAATGGCTGCGCCAGGAACGGTATTACGTTGGCCGGGGAATGTACGAAAGGAGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGTGCAAAATTTTCGTTTGCTTACTTTCTTCAGATCAAGCCACTTGTGGTCCCAACAAGGGATATAATAAAAGAGGATAATATAGTGTACTCTTGGCATGATTTTGTCTCTAAAAATAATCACAATGCTTTGACAGTTATTAGCATATGGGCTCCAGTGGTTTGTATTTATCTGTTGGACATTTATGTGTTTTATACACTTGTATCGGCTGTCTGGGGATTCTTGCTGGGGGCTAGAGCTCGTTTGGGTGAGATAAGGTCATTGGAAGCGCTACAAAAGCTTTTTGAGCAGTTTCCTGGAGCTTTCATGGACACTCTTCATGTTGCTCTACCCAACAGGAGTGCCCAACTGTCATCATTTCAGGTTGTTGAAAAGGACAAGGTTGATGCTTCTCGGTTCTCCCCGTTTTGGAATGAGATTATAAGAAATCTAAGGGAGGAAGATTATATAGCCAACTTTGAACTGGAGTTGCTTTTAATGCCAAGAAATTCTGGAGATATTCCTTTGGTTCAGTGGCCACTCTTTCTACTTGCAAGCAAGGATTTGCTAGAATGCTATTTCTAG 2568 0.4077 MSRAEELWERLVRAALRRERTGDDAFGQPAGGIAGNVPSALAKNRDIDEILRVADEIQDDAPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIARLQEFYKSYRKKNNVDKLLEEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLSEEIPDELKRVMESDSASTEDLIAYNIIPIDAASSTNAIAFFPEVQAAISALKYFNGLPELPRAYFIPPTRNANMLDFLQYTFGFQKDNVANQREHIVHLLANEQSRLGVPDKTEPKLDEAALHEVFLKSLDNYTNWCNYLCIQPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECLCYIFHHMAREMDEILRQQVAHTANSCTSENGVSFLDQVILPLYEVISAEAGNNDNGKASHSSWRNYDDFNEYFWSLHCFELSWPWRKSSSFFQKPEHRSKKISSGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNDGRFDAKTWREVLSLGPTFVVMKFFESVLDIFMMYGAYKTTRRSALSRIFLRFIWFSVTSVFVTFLYIKALQEESKRDSNSVIFKLYVLVIGIYAGVQFFISFLMRIPACHLLTNRCDSWPLIRFAKWLRQERYYVGRGMYERSLDFIKYMLFWLVILSAKFSFAYFLQIKPLVVPTRDIIKEDNIVYSWHDFVSKNNHNALTVISIWAPVVCIYLLDIYVFYTLVSAVWGFLLGARARLGEIRSLEALQKLFEQFPGAFMDTLHVALPNRSAQLSSFQVVEKDKVDASRFSPFWNEIIRNLREEDYIANFELELLLMPRNSGDIPLVQWPLFLLASKDLLECYF 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00091 855 Gene3D - 33 197 IPR023175 -
Vifa3g00091 855 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Vifa3g00091 855 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 156 848 - -
Vifa3g00091 855 SMART FKS1_dom1_2 336 448 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00091 Vifa-Chr3 8204604 8220504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g00091 1 851 Cell Wall Biosynthesis AT3G07160 72.061 0.0 1285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00091 K11000 - gmx:100811473 1467.21