Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05737 ATGGAAAACAAAGAAAACATTGAAGCTGCGAGAAAGTTCCTAACTTCTAGCTTACAAACATCCAAAGCTATTTCTTCTGCATTAGATGAGTCTAGTTCAAGATTGGAGCTTCTTAACAGAAGATTTTTATCCATGCAAGCTTCCCTTAAACCAATCTTAGTTCAAAATCTACCCTTTTCTGATGTTGAACATGGTATAGACAGTGTTCTATGTTCTGTTTCAGCAGTCCACAAGGTGATTGAATGTGTTACTCAGTTGAAACATTGTCTTTCGGCAGATCCAAGTTCCGATTTATTCACATATGTCTCGAACACAAAGAAGCTTGAAGAAGCATTGAAGCTTCTCACTGATAATTGTAACTTAGCATCAGGTTGGTTGAAGAGTGTTTTTGAGTTCTTACAAAACAAAACAACAATTAGTATCAATGACTCATACCTATTGAATTTTAACAGATCATTGAGAATATTGCAAGAATTGCAGACCACAGAGAACGGTGCGCACTTCGATGGAGGAAGTCTTAGCACTGCCCTTGACAAACTAGAGATTGCTTTTCACAAACTTCTAATGGCAAACTCTATGCCTCTTCCTTTGGTTTCATTAACATCACACATTGATCAGCAAAGCAACGATGCAAACCAAGGTTTGGAATTTCCAATTTCTTTCAAGAAGAAGTTACAAGTCATCGCTGAGAGATTAAATGCAAATAATAGGCTAGACAAGTGTCAAGCTATGTATGTTGAAGTTCAAGGAACGAATGCTCGACGAAGTTTGAAGACGTTGGATTTGAGTTACCTGGAGACTTCAACGGCTGAGTTTGAGGTTGTGCGCGGAATGGATAGTTGCATAGACAAATGGGGAAATGATTTGAAGTTAGTTGTTAAGAAACTTCTTGAGGTTGAATACAAGCTATGCACTACTGTATTTGAGAAAATTGGCTCTAAAGCATGGATGAGTTGTTTTGCGAAAATTGCTATTGAATCAGGAATACTTACATTTATCAAATTTGGAAAAATTGTTACGGATAGAAAAAACGACCCTTTTAAGTTGTTGAATCTGTTGTCAATGTTTAAAGTCTTGAATGATTTAAGACTTAAATTTAATCAACTTTTTAGAGGAGAAGCTTGTGAAGAAATCAGAACTGTGACAAAAGATCTTATTACAAGAGTTGTAAATGGTGTTAGTGAAGTATTTTGGCAACTTCCTGAACAAGTAAAGTTGCAAAGACCAACCTGTCCTCCTGCAGATGGAAGTGTTCCTAAGTTGGTAAGTTTTGTTACTGATTATTGTGAAAAGCTTCTTAGTGATGAGTATAAGCCACATTTGAATAAGGTTTTGGAAATATATTTTAGTTGGAAAAATGAAGTATATGAAGAGGGTATAGTTTTGAATCAAATATATAGTATAATTAAGGAAGTTGCAGTTAATTTAGACGATTGGTCAAAAGTGTATGAAGATATCAATTTGTCATGTTTTTTTATGATGAATAATCATTGTCATTTCTATAACTTAAGAGGTACTTTAGTTGGAAATATGATGGGAGATTCTTGGTTAAATGCACATGAACAATACAAAGAGTACTATGCAGCACTTTATTTGAGGAATAGTTGGGGAAATCTTCAAAATATTCTTGTAATTTCTTCCTCTGTGAGTTGTCAAGATTTGGTTAAGAGAATAAGTGCTTTTAGTCTAGCTTTTGATGAAAGGTACAAGAAGCAATGTAATTGGATAATCTCTGATGAGGTATTGAGGAAAAATGTGTGCAAACATTTGGTGGAAGGTGTTATACCAATCTATAAGGTTTATTTGAAGAATTACATTTTGTCAGTTGAAAGTGATGATGTTATGGTTGACAACAAAAATGTTAAATATACAGTACAAAGTTTGGAGAATAGGATTTGGTCATTGTTTCAACCAAAAGTGAAGAAGAATGATAACATTAAACACAAAGATTTGATTAGTCAAATAAAACAAGTTAGCCATAAGTTTGGTTTGACTTTCACTACTCCATAG 2010 0.3408 MENKENIEAARKFLTSSLQTSKAISSALDESSSRLELLNRRFLSMQASLKPILVQNLPFSDVEHGIDSVLCSVSAVHKVIECVTQLKHCLSADPSSDLFTYVSNTKKLEEALKLLTDNCNLASGWLKSVFEFLQNKTTISINDSYLLNFNRSLRILQELQTTENGAHFDGGSLSTALDKLEIAFHKLLMANSMPLPLVSLTSHIDQQSNDANQGLEFPISFKKKLQVIAERLNANNRLDKCQAMYVEVQGTNARRSLKTLDLSYLETSTAEFEVVRGMDSCIDKWGNDLKLVVKKLLEVEYKLCTTVFEKIGSKAWMSCFAKIAIESGILTFIKFGKIVTDRKNDPFKLLNLLSMFKVLNDLRLKFNQLFRGEACEEIRTVTKDLITRVVNGVSEVFWQLPEQVKLQRPTCPPADGSVPKLVSFVTDYCEKLLSDEYKPHLNKVLEIYFSWKNEVYEEGIVLNQIYSIIKEVAVNLDDWSKVYEDINLSCFFMMNNHCHFYNLRGTLVGNMMGDSWLNAHEQYKEYYAALYLRNSWGNLQNILVISSSVSCQDLVKRISAFSLAFDERYKKQCNWIISDEVLRKNVCKHLVEGVIPIYKVYLKNYILSVESDDVMVDNKNVKYTVQSLENRIWSLFQPKVKKNDNIKHKDLISQIKQVSHKFGLTFTTP 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05737 669 PANTHER EXOCYST COMPLEX PROTEIN EXO70 142 636 IPR004140 GO:0000145|GO:0006887
Vifa2g05737 669 Gene3D Exocyst complex component Exo70 75 645 - -
Vifa2g05737 669 Pfam Exo70 exocyst complex subunit 284 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vifa2g05737 669 SUPERFAMILY Cullin repeat-like 76 636 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05737 Vifa-Chr2 1695460468 1695462477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05737 5 647 EXO70 exocyst subunit family AT4G31540 44.697 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05737 K07195 - gmx:121175138 899.042