Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05727 ATGAAGATGAAGTACAAAGCTTGTGAACTTTGCAATCAACAAGCTTCTATCTATTGTCCTTCCGATTCAGCTTTTCTCTGCCGGAACTGTGACCACGCCGTTCACCGTGTTAACTTCCTCGTCGCTCGCCATCGCCGACATATCCTCTGCTTCAAATGCGAAAGTTTCACCGGAATTCACGTCACCGCCACCGAACTCCACCGCTTTCCATCAACTTGCCGCTCTTGCTCACCGGAAAATCATTCCGATGACGCCGATTCTCAATGTTCTTCTTCAGAGTCTTGCATTACGGCACCAAAGAAAACTAAAACTCGAAGGATGAAGACTTGTTCGAGGTCGACCTCTGTTACCGACGATGCTTCTCCGATCGGGAGTAAAAGTGTTGGATCGGTGGCGGAGGAGCTTTTTGAGAAATGGAGGAGAGAATTAGGGTTAGGATTTGCTGTGGACGGAAATCGCGTGGCGGTGGAGGCTTTGCGCGTGTGTTTTAGAACGTGGAAGTTAGTTCCGTTGAAAGTGAGTGCTGCGGCGTCGTTCTGGTTGGGGCTGAGATTGTGTAGGGACAGTTGTTTTGCTACGTTTCAGAATCTGATTAGGTTAGAGAAAATATCAGGAGTGCCAGCTAAGCTTCTTTTGGCCGCACATGCTAAACTCACACGTGTCTTCTTGCAGCGGAAAATTGAAATTGAATGGCAAGAAGGATTTGATGAGTGCGGAGACTAG 723 0.4799 MKMKYKACELCNQQASIYCPSDSAFLCRNCDHAVHRVNFLVARHRRHILCFKCESFTGIHVTATELHRFPSTCRSCSPENHSDDADSQCSSSESCITAPKKTKTRRMKTCSRSTSVTDDASPIGSKSVGSVAEELFEKWRRELGLGFAVDGNRVAVEALRVCFRTWKLVPLKVSAAASFWLGLRLCRDSCFATFQNLIRLEKISGVPAKLLLAAHAKLTRVFLQRKIEIEWQEGFDECGD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05727 240 SMART bboxneu5 3 49 IPR000315 GO:0008270
Vifa2g05727 240 CDD Bbox1_BBX-like 7 47 - -
Vifa2g05727 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 124 - -
Vifa2g05727 240 Pfam B-box zinc finger 4 45 IPR000315 GO:0008270
Vifa2g05727 240 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05727 Vifa-Chr2 1693246978 1693247700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05727 8 237 C2C2-CO-like Transcription Factor Family AT3G21150 31.034 4.95e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05727 - - gmx:102667703 240.736