Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05674 ATGTCTTTGAAGATTGCAGCTGAAAACTTGCCAAAATCATCCTCAAAGAACGTTGAAGAATCATTGATAGTGATAAAAGAGTATGATGAAGTGAAACACAAAGTGGTAGTAGAGAATTTGGAGAGACTTTGTGAAGTTGGACAGAGAGGAAAACCTTCTCTTGTCACTGACTTATTGGGTGATCCTATCTGCAGAATTCGTCACTTTCAGTTACATGTCATGCTGGTCGCTGAATTCGGCCAAGAAGGACAAGTTGTTGGAGTCATAAGAGGTTGTGTGAAAACAGTTACAAGAGGGAATTTACCTTATGTAAAACTTGCTTATGTTTTAGGCCTAAGAGTCTCTCCCAAACACAGGAGATTTGGCATTGGAACAAAACTAGTTGAACATTTAGAAGAATGGTGCAAGCAAAAAGAGGCTAAGTATGCATATATGGCAACCGATTGTACAAATGAACCATCGATAAATTTGTTCACAAAAAAATGTGGTTACTCAAAATTCAGAACACTAACAATGCTAGTGCAACCTGTTCATGCTCACTACAAGCCAATCAGCACAAACATTTCCGTCCTTCGCCTACCACCACGCCTAGCCGGGCCGACTTACAACCATATTTTCACAGATTCTGAATTTTTCCCTAAAGACATAGACTTGATTTTATCTAACAAACTTAACTTGGGCACATTCATGGCCATCCCAAGAAAATACCTTAACAAATGTGATCCAAAAAAGGGTATTTATCCTCAAAGCTATGCAATATTAAGTGTGTGGAACACAAAAGAAGTGTTCAAATTGGAAGTTAAAGGAGTGTCACGATTTGTACATGCATGTTGTGTAGGTACAAGATTATTAGACAAATGTATGCCATGGTTAAGGTTACCTTCATTTCCTAATGTATTTAGGCCATTTGGGATTTATGTAATGTATGGATTACACATGGAGGGTAAATATGGAAAACAACTTATGAAGTCATTATGTGGATTTGTTCATAATATGGCTAGAGATGATGGTGACTGTGGGACCATTGTGGCTGAAGTTAGTCAAAGGGACCCAGTTAAGGATGCTGTCCCACATTGGAGGAAATTTTCTTGGGCAGAAGACATGTGGTGCATTAAGAATCTTGAGGACATGAAGAAGGAATGTGGACCCTTTGATTGCTTTGATTTTAAATCATTTTCAGATGTAATTTTTGTTGATCCTCGTGATTTTTGA 1212 0.3795 MSLKIAAENLPKSSSKNVEESLIVIKEYDEVKHKVVVENLERLCEVGQRGKPSLVTDLLGDPICRIRHFQLHVMLVAEFGQEGQVVGVIRGCVKTVTRGNLPYVKLAYVLGLRVSPKHRRFGIGTKLVEHLEEWCKQKEAKYAYMATDCTNEPSINLFTKKCGYSKFRTLTMLVQPVHAHYKPISTNISVLRLPPRLAGPTYNHIFTDSEFFPKDIDLILSNKLNLGTFMAIPRKYLNKCDPKKGIYPQSYAILSVWNTKEVFKLEVKGVSRFVHACCVGTRLLDKCMPWLRLPSFPNVFRPFGIYVMYGLHMEGKYGKQLMKSLCGFVHNMARDDGDCGTIVAEVSQRDPVKDAVPHWRKFSWAEDMWCIKNLEDMKKECGPFDCFDFKSFSDVIFVDPRDF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05674 403 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 19 403 - -
Vifa2g05674 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Vifa2g05674 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
Vifa2g05674 403 CDD NAT_SF 74 144 - -
Vifa2g05674 403 Gene3D - 20 169 - -
Vifa2g05674 403 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Vifa2g05674 403 FunFam Putative N-acetyltransferase HLS1 38 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05674 Vifa-Chr2 1682187972 1682189996 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa2g05674 Acetyltransf_1 1.7e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05674 - - tpra:123923406 728.013