Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05663 ATGCCTGCCTATGATAGCACTTCACAACTCTCCGGTGCCGGCCAAACCATCTGCGTCACCGGCGCCGGAGGGTTTATAGCTTCTTGGCTTGTCAAACTTCTCTTGGAAAAAGGTTACACTGTTAGAGGAACCCTCAGAAACCCTGAGGATCCAAAGAATGGTCATTTGAAAGAGTTGGAAGGAGCAAAAGAGAGACTAACTTTGCATAAAGTTGATCTTCTTGATCTTAACTCTATTCAATCTGTTGTTCATGGTTGCCATGGTGTATTCCACACAGCTTCTCCGGTCACCGATAACCCTGATGAGATGTTGGAACCAGCAGTAAATGGAACAAAGAACGTGATTGTAGCTTCTGCGGAAGCGAAGGTGAGACGTGTCGTGTTCACTTCATCGATTGGAACGGTCTATATGGACCCAAATACGAGTAGAAATGTTGTTATCGATGAGTCGTATTGGAGTGATTTAGAATATTGCAAGAACACAAAGAATTGGTATTGTTATGGGAAGACAGTGGCAGAACAATCAGCATGGAAAATAGCAAAAGAAAATGAAGTTGATTTGGTTGTGGTGAATCCAGTTTTGGTTCTTGGACCATTACTACAAGAAACCATTAATGCTAGTACAATTCATATTCTCAAGTATCTTAATGGTGCAGCAAAAACATATGTGAATGCAACACAATGTTATGTTGATGTTAAGGATGTTGCATTAGCACACCTTCTTGTTTATGAGACAAATTCTGCTTCTGGTAGATACATTTGTTCTGAAACTTCTTTGCATCGTGGTGAACTTGTTGAAATTTTGGCCAAGTATTTTCCAGAATATCCACTTCCGACCAAATGTTCAGATGAAAAGAATCCAAGAGTGAAACCATACATATATTCAAATCAAAAGCTGAAAGACTTGGGATTGGAGTTCACTCCTGTTAAGCAATGTCTATATGACACTGTTAGAAGCCTACAAGAGAAAGGACACCTTCCTATTCCACCAATGCAACAAGACTCTGTTTAA 1011 0.4016 MPAYDSTSQLSGAGQTICVTGAGGFIASWLVKLLLEKGYTVRGTLRNPEDPKNGHLKELEGAKERLTLHKVDLLDLNSIQSVVHGCHGVFHTASPVTDNPDEMLEPAVNGTKNVIVASAEAKVRRVVFTSSIGTVYMDPNTSRNVVIDESYWSDLEYCKNTKNWYCYGKTVAEQSAWKIAKENEVDLVVVNPVLVLGPLLQETINASTIHILKYLNGAAKTYVNATQCYVDVKDVALAHLLVYETNSASGRYICSETSLHRGELVEILAKYFPEYPLPTKCSDEKNPRVKPYIYSNQKLKDLGLEFTPVKQCLYDTVRSLQEKGHLPIPPMQQDSV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05663 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 321 IPR036291 -
Vifa2g05663 336 CDD FR_SDR_e 18 304 - -
Vifa2g05663 336 Gene3D - 14 336 - -
Vifa2g05663 336 FunFam Cinnamoyl-CoA reductase 1 8 336 - -
Vifa2g05663 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 16 317 - -
Vifa2g05663 336 Pfam NAD dependent epimerase/dehydratase family 17 247 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05663 Vifa-Chr2 1680453209 1680455225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05663 14 280 Monolignol Biosynthesis Gene Families AT1G80820 72.285 8.26e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05663 K09753 - gmx:100811528 572.392