Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g05493 | ATGGCCGGTGGTGGTGGTGGTGGTGGTGGTGGTAGTTCATTGACAGGTTTGCAAGAACATGTGAAGTTGGCAAGAGATTATGCTCTTGAAGGTCTCTATGATACTTCTATCATCTTCTTTGATGGTGCTGTTGCACAAATCAACAGGCATCTAAACAGTGTTGACGACCCTTTGATTCGTGCAAAATGGATGAATGTTAAGAAAGCTCTTTGTGAGGAAACTGAAGTTGTAAAGCAACTTGATGCAGATAAAAGGGCGTTTAAAGATAATCCTATTGGAAGACGTCCTCCGTCGCCTCCGATTTCTACTAAATCTTCCTTTGTTTTTCAGCCGTTAGATGAGTATCCTACTTCATCGAATTCATCTTTCGATGATCCGGATGTGTGGAGGCCACCTAGTAGGGATACTGGAAGTAGAAGACCTGGAAGGGGTGGTCAAGTGAGTAATCGGAAATCTCAACAAGATAGTAAATGGGCTCGAGGTGCTACTACAAAGACAGTTACCACTGGCCGTGGTGGTGCAAAGGCTGGTGGTGCTACTAGCAAAGTTAACTCAGGGGGCCGGACATCAACTCCCGTAAAGAAAGGTGGTGCATCGGGAAAGTCTAGCAAGACAGATGCAGTTAATGGTGATGCTGAAGAAGGGAAGTCGAATAAAGGACAATATGAAGGTCCTGACCCTGAATTGGCTGAAATGCTAGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTTAGATGGGATGATGTTGCTGGTCTCACTGAAGCAAAAAGGCTTTTAGAAGAAGCTGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGGAATTAGGAGACCTTGGAAAGGTGTCCTTATGTTTGGTCCTCCGGGAACTGGAAAGACGCTTCTTGCTAAGGCAGTTGCTACTGAATGTGGAACCACTTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGCGGAGAAAGTGAGCGAATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCTTATGCACCAAGTACAATTTTCATTGACGAAATCGATTCTCTATGTAATGCTAGGGGGGCTTCTGGAGAGCATGAATCGTCTCGAAGGGTGAAATCTGAACTTCTAGTTCAGGTTGATGGTGTAAGCAACAGTGGTACAAATGAAGATGGTAGCAAGAAAATAGTAATGGTCTTGGCAGCTACTAACTTTCCATGGGACATAGATGAAGCACTAAGGAGAAGGCTGGAAAAGAGAATATATATTCCTCTTCCAAATTTCGAGAGTCGTAAAGAGTTGATCCGGATAAATTTGAAGACCGTTGAGGTAGCCCCGGATGTCAACATAGATGATGTGGCTCGTCGAACTGATGGCTATAGTGGAGATGATTTAACAAACGTCTGTCGAGATGCTTCCTTAAATGGAATGAGACGGAAGATAGCAGGAAAGACACGCGATGAAATTAAGAGTATGTCTAAGGATGATATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGGCAAAGGTCCAACGAAGTGTTTCTCCGGCAGATATTGAACGCCATGAAAAGTGGTTTCACGAATTTGGATCAGCATAA | 1596 | 0.4373 | MAGGGGGGGGGSSLTGLQEHVKLARDYALEGLYDTSIIFFDGAVAQINRHLNSVDDPLIRAKWMNVKKALCEETEVVKQLDADKRAFKDNPIGRRPPSPPISTKSSFVFQPLDEYPTSSNSSFDDPDVWRPPSRDTGSRRPGRGGQVSNRKSQQDSKWARGATTKTVTTGRGGAKAGGATSKVNSGGRTSTPVKKGGASGKSSKTDAVNGDAEEGKSNKGQYEGPDPELAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSGTNEDGSKKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDDVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKDDISKDPVAMCDFEEALAKVQRSVSPADIERHEKWFHEFGSA | 531 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g05493 | 531 | MobiDBLite | consensus disorder prediction | 111 | 126 | - | - | |
Vifa2g05493 | 531 | FunFam | Katanin p60 ATPase-containing subunit A1 | 421 | 507 | - | - | |
Vifa2g05493 | 531 | PANTHER | AAA DOMAIN-CONTAINING | 33 | 530 | - | - | |
Vifa2g05493 | 531 | Pfam | ATPase family associated with various cellular activities (AAA) | 283 | 420 | IPR003959 | GO:0005524|GO:0016887 | |
Vifa2g05493 | 531 | SMART | AAA_5 | 279 | 422 | IPR003593 | GO:0016887 | |
Vifa2g05493 | 531 | MobiDBLite | consensus disorder prediction | 182 | 206 | - | - | |
Vifa2g05493 | 531 | FunFam | Katanin p60 ATPase-containing subunit A1 | 241 | 409 | - | - | |
Vifa2g05493 | 531 | Gene3D | - | 12 | 88 | - | - | |
Vifa2g05493 | 531 | Gene3D | - | 241 | 521 | IPR027417 | - | |
Vifa2g05493 | 531 | ProSitePatterns | AAA-protein family signature. | 392 | 411 | IPR003960 | GO:0005524|GO:0016887 | |
Vifa2g05493 | 531 | MobiDBLite | consensus disorder prediction | 87 | 106 | - | - | |
Vifa2g05493 | 531 | Hamap | Meiotic spindle formation protein mei-1 [mei-1]. | 15 | 531 | IPR028596 | GO:0008017|GO:0008568|GO:0051013 | |
Vifa2g05493 | 531 | MobiDBLite | consensus disorder prediction | 111 | 226 | - | - | |
Vifa2g05493 | 531 | Gene3D | - | 421 | 507 | - | - | |
Vifa2g05493 | 531 | Pfam | Vps4 C terminal oligomerisation domain | 484 | 529 | IPR015415 | - | |
Vifa2g05493 | 531 | MobiDBLite | consensus disorder prediction | 142 | 170 | - | - | |
Vifa2g05493 | 531 | CDD | Kp60-NTD | 17 | 82 | - | - | |
Vifa2g05493 | 531 | Pfam | AAA+ lid domain | 442 | 483 | IPR041569 | - | |
Vifa2g05493 | 531 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 234 | 516 | IPR027417 | - | |
Vifa2g05493 | 531 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
Vifa2g05493 | 531 | FunFam | Katanin p60 ATPase-containing subunit A1 | 12 | 88 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g05493 | Vifa-Chr2 | 1636470734 | 1636473568 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g05493 | 235 | 523 | Calmodulin-binding Proteins | AT3G56690 | 39.262 | 2.23e-49 | 181 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g05493 | K07767 | - | zju:112489859 | 895.19 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa2g05493 | 2 | 1636470734 | 1636473568 | Vifa2g05493 | 2 | 1636470734 | 1636473568 | PCT |