Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05480 ATGATTCAAAATGGTGGCACTGTATCCCAAGGTTCTGTCTTGTGTTATGCTTGTCAAATTCCTGCTAAGGTTGCTGTTTCAAGTATCCGAAGTTTCTGGGGACATAGTTTGGAAAATAAGCCAAGAGGAATGACATTCTCCGACATGTCTGCCACATCAAGCCTACTTTTAAGTGGGGGTCAGAATCTTCTGTCTCGGACTATCCCCGTGTTACCTACGCTCCACAAATCTTCTACCACCACTCGGGCAACAAAGGATTCCTCATCTGCCGGCTTTCGGTACCCTCCGATGACAAAAAAACCAAGATGGTGGTGGAGAACACTATCATGCATCCCTTACCTCTTACCTTTCCATCAGGTATGGATGTATGCTCAGACAGCATACAATCTCCACCCGTTTCTCGAGATATTCGAATTCTATACATACCCTTTTCTCATGGCAATCGGAAGTCTACCTAGATGGTCGCTCATAGCATACTTCTTAATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCCGATTCCATGTCGCCGTTGGAATGTTAATCGAGATCGCCCTGCAAGTTACCGGGATTGTAAGCCGATGGATGCCACCTTCGTTCTATTGGGGTCAACTTGGAATGCATTTCTGGACTACTGCATTTTTTCTTTTTCTCTTTACTACCGTAGAGTGCATTAGGTGCGCCCTTGTTGGTATGTATGCCGATATCCCTTTTGTCTGTGATGCCGCATACATCCAAATACCATATGAGTAA 768 0.444 MIQNGGTVSQGSVLCYACQIPAKVAVSSIRSFWGHSLENKPRGMTFSDMSATSSLLLSGGQNLLSRTIPVLPTLHKSSTTTRATKDSSSAGFRYPPMTKKPRWWWRTLSCIPYLLPFHQVWMYAQTAYNLHPFLEIFEFYTYPFLMAIGSLPRWSLIAYFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPPSFYWGQLGMHFWTTAFFLFLFTTVECIRCALVGMYADIPFVCDAAYIQIPYE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05480 255 Pfam Chloroplast import apparatus Tic20-like 75 248 IPR005691 -
Vifa2g05480 255 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 23 254 IPR005691 -
Vifa2g05480 255 NCBIfam Tic20 family chloroplast protein importer 1 255 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05480 Vifa-Chr2 1630889496 1630891527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05480 44 251 Chloroplast and Mitochondria Gene Families AT4G03320 34.597 8.18e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05480 - - gmx:100818669 372.089