Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05456 ATGACGCCATTGATACTACCCAAGCTCACTCTCATGTTTCTTGTACTATCCCTTTTACTCTCTTTCGATCAACACAAACCCACCACCACCACCACCACCACCACCACATTCAATTTCATCAACACCATTCCCATACACTCTTTTTCCAGTGGTTCAGTTTCTTTATCAGCAATCAACAATCACTACTCTCAATCTCTTCTTCAATATGATTTCTACCGCGACTCTTGTCCCCATGCCGAACGCATCGTTCGTTCTACAATTCATCGGCTTCATAAAACTACTCCTTCTTTGATTCCAGCTCTTATTCGTCTCGCTTTTCGTGATTGCTTCATTCAGGGATGTGATGCTTCTATTTTGTTAGATGATGATATTTACATTGATTCGGAGAAAGAGTCGCCTCCGAATGGAAATCTCAAAGGATTTGATGTAATAGATACGATAAAATCCAATCTCGAAGAAGCGTGTCCGGGAATTGTTTCTTGTGCTGATATTGTTGTACTTGCTGCAAGAGATTGTGTTGTTCTGGCTGGTGGTCCATTCTATCCTTTGAATACAGGCAGGAGGGATGGTTCAAACTCTTTTGCTGATATTGCGACAGACGAGCTTCCTTCACCCTATGCTGATTTATCTCAAATCATTGCATCCTTCAAATCAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTGCCCACAACATTGGTGTAATCAACTGCAAATTCTTCAAAAACCGTCTCTATAACTTCAGCGGAACTAATGAACCTGACCCTTCTTTGGACACTGAATTTCTAAATGTACTAAGATCAAGATGCAATGAAGTTGATGCATTGTCCACTTCAACATCAGCATATACATCTCATACCTCACCTTCTTCCTTAATTAAAGAACAGGAAATCACTATGGACTCGGAGAAATCTGTTTCGAATTTTGGGATGTTATACTACCGCAGCCTATTGCAAGGTAAAGGAGTCCTCTACGCCGATCAGCAGCTAATGGAAGGGGAAAAAACTAAGTATTGGGTTCATAAATATGCATCGAATCCTAGTTTGTTCCATCAGGATTTTGCCAGGGCAATGATGAAACTCTCGGATCTCCAGGTTTTGACAATGCCTATGGGACAGATTCGACGCACTTGTTCAAAAGTTGCATGA 1155 0.4113 MTPLILPKLTLMFLVLSLLLSFDQHKPTTTTTTTTTFNFINTIPIHSFSSGSVSLSAINNHYSQSLLQYDFYRDSCPHAERIVRSTIHRLHKTTPSLIPALIRLAFRDCFIQGCDASILLDDDIYIDSEKESPPNGNLKGFDVIDTIKSNLEEACPGIVSCADIVVLAARDCVVLAGGPFYPLNTGRRDGSNSFADIATDELPSPYADLSQIIASFKSRGFDEREMVTLLGAHNIGVINCKFFKNRLYNFSGTNEPDPSLDTEFLNVLRSRCNEVDALSTSTSAYTSHTSPSSLIKEQEITMDSEKSVSNFGMLYYRSLLQGKGVLYADQQLMEGEKTKYWVHKYASNPSLFHQDFARAMMKLSDLQVLTMPMGQIRRTCSKVA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05456 384 Gene3D Peroxidase, domain 2 203 363 - -
Vifa2g05456 384 ProSiteProfiles Plant heme peroxidase family profile. 66 384 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 SUPERFAMILY Heme-dependent peroxidases 67 383 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Haem peroxidase superfamily signature 98 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Haem peroxidase superfamily signature 177 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Haem peroxidase superfamily signature 159 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 Pfam Peroxidase 83 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 Gene3D - 70 383 - -
Vifa2g05456 384 CDD secretory_peroxidase 67 383 IPR033905 GO:0004601|GO:0042744
Vifa2g05456 384 PANTHER PEROXIDASE 25-RELATED 36 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 FunFam Peroxidase 70 208 - -
Vifa2g05456 384 PRINTS Plant peroxidase signature 358 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 177 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 139 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 100 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 158 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 224 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 318 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 PRINTS Plant peroxidase signature 76 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05456 384 FunFam Peroxidase 203 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05456 Vifa-Chr2 1624020160 1624021771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05456 57 383 Peroxidase AT4G33870 49.419 2.80e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05456 K00430 - rvl:131336416 405.986