Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05423 ATGAAAATGTCACAACAAAATGTCTCTATAGACAATGGTTCTAACGCTTCGAAAAAAAGCACTAATGGTGATTCATGGGAAGAACAATTTTTTAGTTCTTTCAATGACATGGATCAAGATCTAGCTAAGAACATTGACAGAGAAGGATTTTCTGGAGGTAGCACAGCTATAACATTAATTAAAAAGGCGATTCTCGTGCAGTTCTTTGCACAAAAGCAAATGACAATAATCGTGTTCCCTATTCAACTTACGGTTGACTTGGTTCCTGATGTTCCAAGTGAAGCAAATAGAGTGATGAAATGTGGAGGTAGAGTTTTTCCAGCACAAGAAGATCCTGAAGTAAATAGAATTTGGTTACCTGAAGGTGATTGTCCAGGACTAGCTATGACAAGAGCCTTTGGTGACTTTTGCCTAAAAAAGTACGGCCTCTCCTCAGTTCCTGAGGTGTTTTATAGAAAACTTTTAAAGGAAGATGAATTTGTTGTTATGGCTACTGATGGGATATGGAATGTACTATCAAACAATGAAGTAATAACCCTAGTTGCTTTAGCGCCAAAGAGGTCATTAGCAGCAAAATTGATAGTAAGACGTGCTGTTCAAGTTTGGAAACAAAAGTTTCCATCTTACCATATTGATGATTGTTCAGCCATATGTTTATTCTTCGATGAAGATCAGTCGGTTAGTGTGAGAGGAAAGAAAAGGCATTGCTAG 711 0.3741 MKMSQQNVSIDNGSNASKKSTNGDSWEEQFFSSFNDMDQDLAKNIDREGFSGGSTAITLIKKAILVQFFAQKQMTIIVFPIQLTVDLVPDVPSEANRVMKCGGRVFPAQEDPEVNRIWLPEGDCPGLAMTRAFGDFCLKKYGLSSVPEVFYRKLLKEDEFVVMATDGIWNVLSNNEVITLVALAPKRSLAAKLIVRRAVQVWKQKFPSYHIDDCSAICLFFDEDQSVSVRGKKRHC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05423 236 Gene3D - 3 229 IPR036457 -
Vifa2g05423 236 PANTHER PROTEIN PHOSPHATASE 23 219 IPR015655 GO:0004722|GO:0006470
Vifa2g05423 236 SUPERFAMILY PP2C-like 22 222 IPR036457 -
Vifa2g05423 236 Pfam Protein phosphatase 2C 82 197 IPR001932 -
Vifa2g05423 236 SMART PP2C_4 1 219 IPR001932 -
Vifa2g05423 236 CDD PP2Cc 21 221 IPR001932 -
Vifa2g05423 236 ProSiteProfiles PPM-type phosphatase domain profile. 1 221 IPR001932 -
Vifa2g05423 236 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05423 Vifa-Chr2 1614702223 1614703540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05423 26 236 PP2C-type Phosphatase Gene Family AT1G03590 45.455 9.14e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05423 - - cam:101501265 314.309