Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g05372 | ATGTCTTCCCGGACTCCATTTTCCGGCGACGACGATGACGATATTGTTAACGACGATTTCTTAAACTTCCCATTCTTCGGTGTAAACCTCCCCGCCAGAATCAGCCGAAAATACGACGTGTTCTTGAGTTTCAGAGGCGAAGACACTCGCGCATCTTTCACTTCACATCTTTACGCCTCTCTTCAAAACGCCGGAATCATAGTTTTCAAAGACGATCAATCAATTCAAAGAGGAGATCAAATCCCAGAATCACTACTGCGAGGGATCGAAGATTCTGTGATTTCTATTATTGTGTTCTCCAGAAACTACGCGGATTCTCCGTGGTGTCTTCAGGAGTTGGTGAGAATAATGGAGTGTCGTAGAACTGTAGGTCAGGTGGTTCTTCCTGTGTTCTATGATATGTATCCGTCGGAAGTTCGGAGGCAGACAGGAGAGTTTGGTAAAGCTTTTCAAAGTCATTTGAAGAGATTTTCAACGGAGGATGAGTTGTGTATGGAACAAGGTTGGAGATTGGCGCTTCACGAGGCTGCTTGGCTTTCAGGGTTTGTTGTCCTCAATTCCAGGGATGAATGTGAGATTGTCAAGAGTATTGTTGCAAATGTTACACGTTTGCTAGACAAGACAGACTTGTTCATTGCTGATAATCCGGTTGGAGTAGAATCTCGAGTGCAAGATATGATTCAACTTCTAGACTCTCAACAATCCAATGATGTTCTACTACTAGGGATGTGGGGGATGGGTGGAATTGGTAAAACAACCATTGCAAAAGCCATCTTCAATAAAATTGGCCGCAATTTTGAAGGTAGGAGTTTTCTTGCAAATGTTAGAGAGGTTTGGGAGCAAGCTACTGGACCAACATATTTACAAGAACGACTTATGCATGATATTTTCAATGAAACAACCAAGATACAAAGCATTGAATTTGGAAAAAATATATTTAAGGAAAGACTTAGTAAGAAAAGAATACTTCTTATACTTGACGATGTAAATAAATTGGACCAACTAAATGCTTTGTGTGGAAATCGTAAATGGTTTTCTTTTGGGAGTAGAATAATCATCACAACAAGAGATAAGCATATACTTAGAGGGAATAGAGTTGACAAAATATACATGATGAAAGAAATGGATGAAAGGGAATCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAAACAAGTCCCAAAGAAGATTTTTCTGAAATTTCAAGAAATGTAGTTAAGTATTCCGGGGGATTACCGCTAGCTCTTGAAGTCCTTGGGTCCTATTTATTTGATCGAGAGATATTAGAGTGGAATTGTGTATTGGAGAAACTCAAAAAAATTCCCAATGATCAAGTATATAAGAAGTTAAAAATAAGCTATGATGGTTTAAATGATGACACAGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGAATGGACCGATATGATGTTATTCATATATTAAATGGTTGTGGACTTTTCGCAGAAATTGGAATATGTATCCTTATTGAGCGAAGCCTTGTAACGGTTGATGATAAGAACAAGCTTGGTATGCATGATTTGCTGCGAGATATGGGAAGAGAAATCATTCGGGAAAAGTCTCCAAAGAAGCCGGAGGAACGTAGCAGGTTGTGGTTTCACGAGGATGTGCTTGATGTATTATCCGAACATACTGGAACAATTGATGTTGAGGGACTGATTTTGAAGCTTCTAAGTCTTAGTGCACAATGTTTCAGTACTAAAGCATTTGAGAACATGAAGAGACTCAGATTGCTTCAACTTTCTGGTGCACAACTTGATGGAGATTTTAAATATCTTTCAAGAAATTTGAGATGGCTGTATTGGAAAGGATTTCATTTAACATGCATACCTTCAAACTTCTATCAAAGAAATTTAATTTCCCTTGAGTTAGAAAACAGCAATGTCAAACTTGTGTGGAAAGAGATGCAGATGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCACTATCTGACACAGACCCCAGACTTTTCAAACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCTAGGTTGTCTGAGGTATCCGATAGCATTGGACATCTCAATAAAGTTCTTCTGATAAATTTGAAAGACTGTATTGGCCTTCGTAATCTTCCAAGGAACATCTATACGTTGAAATCCCTGAAAACTCTCATTCTATCTGGATGTTTAATGATTGACAAGTTGGAAGAAGACTTTGAACAGATGGAATCTTTATCCACTCTGATGGCAGATAACACAGCTATAACAAAAGTTCCCTTTTCAATAGTAAGGTCAAAAAGCATTGGATACATTTCTTTGTGCGGATACAAAGGATTCTCGTGTGATGTGTTTCCTTCCATCATTCAGTCTTGGATGTCACCAATAAATAATCTCTCACCCCCTATTTTAACAACTACCGGCATGTCATCCCTTATTTCTTTAGGTTCATCCAGCAGCTGTTTCCACGATCTATCATCTATTACCATTTGCATTCCAAAGCTTCTAACCCTTTGGCTAGAGTGTGGATCAGAGTTTCAACTTTCACAAGACAAAACAAGAATTTTAAATGCTTTAAGTGCAACAAATTCTATAAAATTGGAATTGGAACACTCGATTGGAACTACGTCACAAATATCAGATGTGAAGACTTCATTGTTAATTGAATGTCAGAGTCAAGTGCATGTTTCAACATCGAGAAATTCCTTGAAGTCTCTTATAATTCAAATGGGAATGAATTGTCTAATCACCAACATTCTAAAAGAGAGGATCTTACAGAATTTGACAGTTGATGGATGTGATAATTTTTTGCTACCTGTTGATAAATACCCAGATTGGTTAACTTTCAATTCAGAAGGTTCTTCTGTAATTTTTGAAGTCCCTCAAGTGGAAGGTCATAGTTTGAAGACAATGATGTGCATTGTCTATTCTTCAAGCCCAGATGACGTAACAACAGATGGCCTTAAAAATGTGTTGGTGATTAATCACACAAAGGCCACCATTCAACTCTATAAGAGAGAGGCGTTATCGTCCTTTGGAAATGAGGAGTGGCAGAGAGTGGTATCAAGTATGGAAACTGGTGACAAAGTGGAGATTGTTGTCATTTTTGGGAACAGTTTCGTTGTGAAGAAGACAGCGATATATCTCATATATGGTGAACCATTCTGCGAAAAAACGGACCAATTTCATGCACCAGATAAGAGTGCTGTTGCTGGCGATCATGAAACTGATTGCGCTGCCAAGAGGGTCTCTCCTCAAGTAGAGCCCACAGATGATTTTAAACAAAGAGAGAAAAGAAGAAAACACTGCTTAAGAGAGACCTGCACCCTTGATGTTGAGTATAGGAGCATCTTGCTTAATGCATACATTGTTTCGTTCAACTTCATCCCTACTGCAGCTGGATTGGATTCGTCGGCTGTGCAGGTTTTACATGTCCAGAGAAAGAACCATTGTCCATTACCAAAGTCAAGGATTTTGAGACCTCTGCTACTGCATTACAACAATCGCAATTGCTTCACATCATGCCATTTACCCACAATTTTCTACAATATTGAAGATTGGATGTAA | 3570 | 0.3843 | MSSRTPFSGDDDDDIVNDDFLNFPFFGVNLPARISRKYDVFLSFRGEDTRASFTSHLYASLQNAGIIVFKDDQSIQRGDQIPESLLRGIEDSVISIIVFSRNYADSPWCLQELVRIMECRRTVGQVVLPVFYDMYPSEVRRQTGEFGKAFQSHLKRFSTEDELCMEQGWRLALHEAAWLSGFVVLNSRDECEIVKSIVANVTRLLDKTDLFIADNPVGVESRVQDMIQLLDSQQSNDVLLLGMWGMGGIGKTTIAKAIFNKIGRNFEGRSFLANVREVWEQATGPTYLQERLMHDIFNETTKIQSIEFGKNIFKERLSKKRILLILDDVNKLDQLNALCGNRKWFSFGSRIIITTRDKHILRGNRVDKIYMMKEMDERESLELFSWHAFKQTSPKEDFSEISRNVVKYSGGLPLALEVLGSYLFDREILEWNCVLEKLKKIPNDQVYKKLKISYDGLNDDTEKEIFLDIACFFIGMDRYDVIHILNGCGLFAEIGICILIERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKKPEERSRLWFHEDVLDVLSEHTGTIDVEGLILKLLSLSAQCFSTKAFENMKRLRLLQLSGAQLDGDFKYLSRNLRWLYWKGFHLTCIPSNFYQRNLISLELENSNVKLVWKEMQMMEKLKILNLSHSHYLTQTPDFSNLPNLEKLVLKDCPRLSEVSDSIGHLNKVLLINLKDCIGLRNLPRNIYTLKSLKTLILSGCLMIDKLEEDFEQMESLSTLMADNTAITKVPFSIVRSKSIGYISLCGYKGFSCDVFPSIIQSWMSPINNLSPPILTTTGMSSLISLGSSSSCFHDLSSITICIPKLLTLWLECGSEFQLSQDKTRILNALSATNSIKLELEHSIGTTSQISDVKTSLLIECQSQVHVSTSRNSLKSLIIQMGMNCLITNILKERILQNLTVDGCDNFLLPVDKYPDWLTFNSEGSSVIFEVPQVEGHSLKTMMCIVYSSSPDDVTTDGLKNVLVINHTKATIQLYKREALSSFGNEEWQRVVSSMETGDKVEIVVIFGNSFVVKKTAIYLIYGEPFCEKTDQFHAPDKSAVAGDHETDCAAKRVSPQVEPTDDFKQREKRRKHCLRETCTLDVEYRSILLNAYIVSFNFIPTAAGLDSSAVQVLHVQRKNHCPLPKSRILRPLLLHYNNRNCFTSCHLPTIFYNIEDWM | 1189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g05372 | 1189 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 38 | 860 | IPR044974 | GO:0006952 | |
Vifa2g05372 | 1189 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 34 | 207 | - | - | |
Vifa2g05372 | 1189 | SUPERFAMILY | L domain-like | 565 | 910 | - | - | |
Vifa2g05372 | 1189 | ProSiteProfiles | TIR domain profile. | 36 | 205 | IPR000157 | GO:0007165 | |
Vifa2g05372 | 1189 | Gene3D | Ribonuclease Inhibitor | 563 | 795 | IPR032675 | - | |
Vifa2g05372 | 1189 | SUPERFAMILY | "Winged helix" DNA-binding domain | 445 | 551 | IPR036390 | - | |
Vifa2g05372 | 1189 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 206 | 469 | IPR027417 | - | |
Vifa2g05372 | 1189 | SMART | till_3 | 37 | 179 | IPR000157 | GO:0007165 | |
Vifa2g05372 | 1189 | Gene3D | - | 35 | 203 | IPR035897 | - | |
Vifa2g05372 | 1189 | Pfam | TIR domain | 37 | 202 | IPR000157 | GO:0007165 | |
Vifa2g05372 | 1189 | SMART | AAA_5 | 237 | 376 | IPR003593 | GO:0016887 | |
Vifa2g05372 | 1189 | PRINTS | Disease resistance protein signature | 409 | 423 | - | - | |
Vifa2g05372 | 1189 | PRINTS | Disease resistance protein signature | 647 | 663 | - | - | |
Vifa2g05372 | 1189 | PRINTS | Disease resistance protein signature | 240 | 255 | - | - | |
Vifa2g05372 | 1189 | PRINTS | Disease resistance protein signature | 316 | 330 | - | - | |
Vifa2g05372 | 1189 | Pfam | NB-ARC domain | 220 | 444 | IPR002182 | GO:0043531 | |
Vifa2g05372 | 1189 | Gene3D | - | 204 | 369 | IPR027417 | - | |
Vifa2g05372 | 1189 | Gene3D | - | 374 | 458 | IPR042197 | - | |
Vifa2g05372 | 1189 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 35 | 181 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g05372 | Vifa-Chr2 | 1600395159 | 1600400651 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g05372 | 35 | 764 | WRKY Transcription Factor Family | AT4G12020 | 32.620 | 1.50e-91 | 323 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g05372 | - | - | gmx:100808685 | 1449.11 |