Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05355 ATGTCCATAAACAATAATGTGATAGATGTTTTACAAGATCAAAAGTGGGCGCCTATGCCCTGGAAAAAGTTACAGGTCGGATATATTATCAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACACTGGAGAGGAAACTTGACAAGCTCATACTCGCTCTCTTTGCAACACTCTTTATGATGTGTTTCATTGGAGCCATAGGCAGCGCTATTTTTGTGAACAAAAAATACTTCTATTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAATCCAAAAAACAGATTTCTGGTTTTTATCCTGACTATGTTTACCCTTATCACACTGTATTCAACAATCATCCCAATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGATTTGGGAATGTACCACAATGAAACTAATACACCGGCACTGGCCAGAACTTCAGATCTGAATGAAGAACTTGGACAGGTGGAATACATTTTCTCTGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCGATAGGACGCAATGGCATGAAAATTGAGGAAAATAGACCGCCCCATACTGTGCATGAGAAGGGTTTCAATTTTGAAGATGCCAGGCTTATGAGAGGAGCTTGGAGGAATGAACCCAATCCTGATGCCTGCAGACAATGTATCAATGAAGATGTTGAAAAGGACGATATAAATGATGAAATTCAAGAGGACGACATAAATGATAAAATTCAAGAGGACGACCTAAATGATAAAATTCAAGAGGACGACGTAGATGACGAATTTCAAGAGGACGACATAGATCTAGATGATGAATTTCAAGAGGAGGATATAGATGGTGAATTTCAAGAGGACGACGTAGATGAAGAATTTATGGAGGATGACATATCTAACGAATTTCAAGAGGACGATCTGGATGCTTTACTCCTAGAAGACAAACTTGAATGA 993 0.3787 MSINNNVIDVLQDQKWAPMPWKKLQVGYIIKVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHNETNTPALARTSDLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGRNGMKIEENRPPHTVHEKGFNFEDARLMRGAWRNEPNPDACRQCINEDVEKDDINDEIQEDDINDKIQEDDLNDKIQEDDVDDEFQEDDIDLDDEFQEEDIDGEFQEDDVDEEFMEDDISNEFQEDDLDALLLEDKLE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05355 330 MobiDBLite consensus disorder prediction 257 290 - -
Vifa2g05355 330 Gene3D - 182 211 IPR023299 GO:0000166
Vifa2g05355 330 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 235 - -
Vifa2g05355 330 ProSitePatterns E1-E2 ATPases phosphorylation site. 174 180 IPR018303 -
Vifa2g05355 330 Gene3D - 38 168 - -
Vifa2g05355 330 MobiDBLite consensus disorder prediction 266 290 - -
Vifa2g05355 330 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 166 IPR023298 -
Vifa2g05355 330 FunFam Phospholipid-transporting ATPase IC 169 181 - -
Vifa2g05355 330 Gene3D - 169 181 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05355 Vifa-Chr2 1594270697 1594274400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05355 1 32 Primary Pumps ATPases AT1G59820 59.375 3.31e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05355 K14802 - gmx:100815547 379.793