Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05351 ATGGCAACCGCAACCGCCACCGCCACCGCCGCTGCCACTTCATCCTTCATGGGAACTCGTCTCCGTGAAGTCCAATCCTATACCGGCCGAGTACAAGCCAAATTCGGCGGCTTCGGATTCGGAAAGAAGAAAGCCGCACCAAAGAAACCGTCCCGCTCGGCTCCAACCACCGATCGTCCCTTATGGTTTCCCGGAGCAAAGTCGCCGGAGTATCTAGACGGAAGCTTGGTCGGCGATTACGGTTTCGATCCATTTGGTTTGGGGAAACCAGCTGAGTATTTGCAATTTGATCTTGATTCTCTTGATCAGAATCTGGCGAAGAATCTTGCCGGAGATGTGATCGGAACTAGGACGGAGTTTGATGATGTTAAATCGACCCCGTTTCAGCCTTATACTGAAGTCTTTGGACTTCAGAGGTTTAGAGAATGTGAGCTGATTCATGGGAGATGGGCTATGCTTGCTACTCTTGGTGCTCTTACCGTTGAATGGCTTACCGGAGTTACATGGCAAGACGCCGGAAAGGTTGAACTAGTGGAGGGATCAACATATCTTGGACAACCACTTCCATTCTCAATCACAACATTGATTTGGGTAGAAGTTCTAGTAATTGGCTACATTGAATTCCAGAGAAACGCAGAGCTCGACTCCGAAAAGAGACTATACCCAGGTGGAAAATTCTTCGACCCACTCGGTTTAGCAGCTGACCCAGAGAAGAAAGCAACACTTCAATTGGCTGAAATCAAACATGCTCGTCTTGCTATGGTTGCTTTCCTTGGTTTTGCTGTTCAAGCTGCTGCTACTGGTAAAGGACCTCTTAACAATTGGGCTACACATTTGAGTGATCCTCTTCACACTACCATCATTGATACCTTTTCTTCCTCTTAG 885 0.4791 MATATATATAAATSSFMGTRLREVQSYTGRVQAKFGGFGFGKKKAAPKKPSRSAPTTDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFDDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTLIWVEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05351 294 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 290 IPR001344 GO:0009765|GO:0016020
Vifa2g05351 294 Pfam Chlorophyll A-B binding protein 69 264 IPR022796 -
Vifa2g05351 294 SUPERFAMILY Chlorophyll a-b binding protein 53 292 - -
Vifa2g05351 294 FunFam Chlorophyll a-b binding protein, chloroplastic 104 293 - -
Vifa2g05351 294 Gene3D Chlorophyll a/b binding protein domain 62 294 - -
Vifa2g05351 294 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05351 Vifa-Chr2 1593238624 1593239653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05351 16 294 Chloroplast and Mitochondria Gene Families AT3G08940 85.357 1.55e-175 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05351 K08915 - gmx:100785180 500.745