Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05346 ATGGCCAAACAAGAAATTTCAAAACAAGGGTGTTTCTCTAGTTTCTTCAAAGTGCTTCTTTGTGCTAGAAATGAAACTAGTCCACCAGTGTATCCATCTGAAAAAGTTGAAGAAGAAAAATATGATTTTTTTGATGATTCTAATTCTATAACCACTCCTAGTGTAGTAGCTAGGTTAATGGGATTAGATTCACTACCAAAAACCAAAAGGGTTGTTAGAGAAACAACCTTAGATTGTGTTCCTAGAAGTAAATCAGTTAACTTTGTTGATTACTTGCTTGAGTTTGATCAAAGCATTGGAAACCATCGTAGGGTGAAAACTTCATCATCTTTTAGAGAAGTTCCTTCACAAAAAAATTACCTTTTTGTCCTTGATATTGATGATAAAAAGGGTAATAAAGTCCAAGAAGAAAATGTAACTAAGTTGAAGAAAAAGAACAAGGAAATTGTGAGAGTGAAGAAAGAGAAAAACAAGAGAGTTTATAAGATAAAAGATGAACCAAGAAAAGTTCCTTCTTCTAGGTATAAATCTAAGGTTAGAGATTGTAGAAAAGGTGAAGTTTTTTCAAGTGTTTCTCCTAGGTGTAATTGTGGTTATTATGGTTATGGTGATGTTGGTTCAAGTTCAAGTTCAAGTTCAGTTTCTCCATTGCCAAAAAGTAGGATTAAGAAAGGGTTTGTTGAACCAAAAATGAGGAACAAGGTGAGTAAGAATCATGTGTCAACAAAGAAGATTCAGACAGAACATAGCTTGGAAAATCTTAGTCCTATTTCTGTTCTTGATGTTAATGATTATGCCTTTCTTTATGGAGCTGATTATTCAGGTACAAACACCTTGGCTTCAAAGTCAAAGAGGAAATCTAAGTCTTTATTGGAAGTGTCCTTGGATGAAGATGTTGAAGAGAAAGCAAACAATAATAAAGGTTATGCCTCCCACACTGACATCAACAGAGAAGCAGAGTTGTACTCAGACTTGATGTTGAAGATTCGTAGTTTCACAGAAGAGAGTATCAACAAGTCAGATTCCACATATAAGGCTGAAAGCTTTGAGGAAATTTGTTTCGTGTTTGAAGAAACTATTTTTGATACTTTGTTATTTGAGGTCTTAAATGAACTTGTATAA 1122 0.3369 MAKQEISKQGCFSSFFKVLLCARNETSPPVYPSEKVEEEKYDFFDDSNSITTPSVVARLMGLDSLPKTKRVVRETTLDCVPRSKSVNFVDYLLEFDQSIGNHRRVKTSSSFREVPSQKNYLFVLDIDDKKGNKVQEENVTKLKKKNKEIVRVKKEKNKRVYKIKDEPRKVPSSRYKSKVRDCRKGEVFSSVSPRCNCGYYGYGDVGSSSSSSSVSPLPKSRIKKGFVEPKMRNKVSKNHVSTKKIQTEHSLENLSPISVLDVNDYAFLYGADYSGTNTLASKSKRKSKSLLEVSLDEDVEEKANNNKGYASHTDINREAELYSDLMLKIRSFTEESINKSDSTYKAESFEEICFVFEETIFDTLLFEVLNELV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05346 373 PANTHER OS05G0128300 PROTEIN 1 373 - -
Vifa2g05346 373 Pfam DUF761-associated sequence motif 45 70 IPR032795 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05346 1 372 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 25.499 6.08e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05346 - - tpra:123924863 483.796